Job Description P76143 Confidence 97.14% Date Thu Jan 5 12:19:36 GMT 2012 Rank 176 Aligned Residues 135 % Identity 14% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																				.	.		.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.							.	.	.														.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.							.	.	.														.	.	.	.	.	.	.
Query Sequence		E	A	V	A	L	S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	.	E	Y	E	H	Q	S	.	.	.	I	K	N	I	I	Q	L	V	D	A	G	M	K	.	.	.	.	.	.	.	V	G	M	P	T
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.							.	.	.														.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.							.	.	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	Y	R	D	A	T	L	R	A	I	K	A	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R	A
Template Known Secondary structure														T	T		S								T	T	S								T	T	T					S	T	T	S	T	T																										T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.																				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	.	G	A	Q	I	I	K	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	E	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L
Query Conservation																													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	E	E	T	R	G	S	D	L	G	Y	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	V	S	N	I	Q	Y	L	A	I	A	S	W	G	R	H	I	Y	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	V	N	Q	I	V	Y	E	H	L	A	G	R	I	P	L	I	A	S	G	G	I	N	S
Template Known Secondary structure			S					T	T																				S										T	T			G	G	G		B				S	S	T	T	T	T	S	B										T	T	S	S						S	S			S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	H
Query Conservation
Alig confidence					.	.	.	.	.									.
Template Conservation					.	.	.	.	.									.
Template Sequence		P	E	S	.	.	.	.	.	A	L	D	A	L	Q	H	A	.	D	X	V	G	X	S	S	P	F	V	T	E	P	D
Template Known Secondary structure					.	.	.	.	.					G	G	G		.	S					S	T						T	T
Template Predicted Secondary structure					.	.	.	.	.									.
Template SS confidence
		310	.	.						.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions