Job Description P76143 Confidence 99.47% Date Thu Jan 5 12:19:36 GMT 2012 Rank 33 Aligned Residues 229 % Identity 14% Template c3l52A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: crystal structure of putative orotidine 5'-phosphate2 decarboxylase from streptomyces avermitilis ma-4680 Resolution 1.35 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.									.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.																																														.	.
Query SS confidence																					.	.	.	.	.	.	.	.																																														.	.
Query Sequence		R	L	S	R	I	F	N	P	K	T	G	K	T	V	M	L	A	F	D	.	.	.	.	.	.	.	.	H	G	Y	F	Q	G	P	T	T	G	L	E	R	I	D	I	N	I	A	P	L	F	E	H	A	D	V	L	M	C	T	R	G	I	L	R	S	V	V	P	P	A	T	N	R	.	.	P	V	V	L	R	A
Query Conservation																					.	.	.	.	.	.	.	.																																														.	.
Alig confidence													.	.							.	.	.	.	.	.	.	.																																														.	.
Template Conservation													.	.
Template Sequence		R	L	S	R	A	X	D	D	R	G	P	.	.	L	C	V	G	I	D	P	H	A	S	L	L	A	D	W	G	L	S	D	D	V	A	G	L	E	R	F	S	R	T	V	V	E	A	L	G	E	H	V	A	V	F	K	P	Q	S	A	F	F	E	R	F	G	S	R	G	V	A	V	L	E	K	T	V	A	E	A
Template Known Secondary structure												S	.	.															T	T			S	S																T	T	T		S					B						T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
			109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.
Predicted Secondary structure		.																									.	.	.	.	.	.	.	.																																												.
Query SS confidence		.																									.	.	.	.	.	.	.	.																																												.
Query Sequence		.	S	G	A	N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	.	.	.	.	.	.	.	.	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	.	V	G	K
Query Conservation		.																									.	.	.	.	.	.	.	.																																												.
Alig confidence		.																									.	.	.	.	.	.	.	.																											.	.	.	.	.													.
Template Conservation																																																													.	.	.	.	.
Template Sequence		R	A	A	G	A	L	V	V	X	D	A	K	R	G	D	I	G	S	T	X	A	A	Y	A	E	A	F	L	R	K	D	S	P	L	F	S	D	A	L	T	V	S	P	Y	L	G	Y	G	S	L	R	P	A	V	E	L	A	R	E	.	.	.	.	.	S	G	A	G	L	F	V	L	A	L	T	S	N	P	E	G
Template Known Secondary structure				T	T																								S	S	T	T	S	T	T			S							T	T		G	G	G	G										.	.	.	.	.		T											S	T	T	T
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		179	180	.	.	.														.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Query Sequence		D	M	V	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I	I	K	T	Y	Y	V	E	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	.	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation
Template Sequence		G	E	V	Q	H	A	V	R	T	D	G	R	D	V	A	A	T	X	L	A	H	L	A	A	E	N	A	G	E	E	P	L	G	S	F	G	A	V	V	G	A	T	L	G	D	L	S	S	Y	D	L	D	I	N	G	P	L	L	A	P	G	I	G	A	Q	G	A	A	P	A	D	L	P	G	V	F	G	A	A	V
Template Known Secondary structure						T		B		T	T	S		B													T	T	T		S	S			S							T	T		S		G	G	G	S				S	S	S							T	T	S	T	T		S	G	G	G						G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	H	P	V	A	M	M	K	A	V	Q	A	V	V	H	H
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		R	N	V	.	V	P	N	V	S	R	G	V	L	R	H	G	P	D	V	R	A	L	R	T	A	A	D	R	F	A	E
Template Known Secondary structure		G	G		.					S					T	T	T	T
Template Predicted Secondary structure					.
Template SS confidence
		242	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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