Return to main results Retrieve Phyre Job Id

Job DescriptionP76143
Confidence67.95%DateThu Jan 5 12:19:36 GMT 2012
Rank377Aligned Residues72
% Identity18%Templatec3ktcB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution
Resolution1.54 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130... ......140.........150.........160.........170....... ..180.... .....190
Predicted Secondary structure 
.











........





.......
Query SS confidence 






.











































. . . . . . . .






. . . . . . .





Query Sequence  MDDAVRL. NSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVG. . . . . . . . KDMVRDQ. . . . . . . RYFSLA
Query Conservation 

 



.




 

   

  
   
  
  
 
     




      ........
    
 .......  

  
Alig confidence 






.













......























........






.......





Template Conservation 
   
   
   


  
    ......    


  
   

 
  
           
 
 


   
  

   
  
Template Sequence  INAAKEVGELSYVDLPYPFTPG. . . . . . VTLSEVKDALKDAGLKAIGITPEIYLQKWSRGAFTNPDPAARAAAFELXHES
Template Known Secondary structure  SSS
STT......

T

TTSGGGTT
STT
SS
Template Predicted Secondary structure 










......





















Template SS confidence 















































































   38.40.........50......... 60.........70.........80.........90.........100.........110.
 
   191........200....
Predicted Secondary structure 


Query SS confidence 













Query Sequence  TRIAAEMGAQIIKT
Query Conservation 



 







 
Alig confidence 













Template Conservation 

 
  


  
 
Template Sequence  AGIVRELGANYVKV
Template Known Secondary structure  T
S
Template Predicted Secondary structure 



Template SS confidence 













   112.......120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions