Job Description P76143 Confidence 97.81% Date Thu Jan 5 12:19:36 GMT 2012 Rank 123 Aligned Residues 130 % Identity 15% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.																				.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.												.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.												.
Query Sequence		S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S	E	Y	E	H	Q	S	.	.	.	I	K	N	I	I	Q	L	V	D	A	G	.	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.												.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.												.
Template Conservation
Template Sequence		A	A	K	R	A	N	L	A	G	Y	D	V	V	E	I	H	A	A	H	G	Y	L	I	H	E	F	L	S	P	L	S	N	K	R	K	D	E	Y	G	N	S	I	E	N	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K	P	I	F	V	R	V	S	A	D	D	Y	M	E	G	G	I
Template Known Secondary structure										T		S								T	T	S								T	T	T					S	T	T	S	S	S					T													T	S		T	T	S											S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.															.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Query Sequence		D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	.	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Alig confidence														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.									.
Template Conservation														.																																																					.	.	.	.	.
Template Sequence		N	I	D	M	M	V	E	Y	I	N	M	I	.	K	D	K	V	D	L	I	D	V	S	S	G	G	L	L	N	V	D	I	N	L	Y	P	G	Y	Q	V	K	Y	A	E	T	I	K	K	R	C	N	I	K	T	S	A	V	G	L	I	T	T	Q	E	L	.	.	.	.	.	A	E	E	I	L	S	N	E	R	A
Template Known Secondary structure														.	T	T	T		S									S	S								T	T	T	T												T							S	S							.	.	.	.	.							T	T	S
Template Predicted Secondary structure														.																																																					.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	D	M	G	R	N	I	F	Q	S	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	V	A	L	G	R	E	L	L	R	N	P	Y
Template Known Secondary structure		S					S							T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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