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Job DescriptionP76143
Confidence97.31%DateThu Jan 5 12:19:36 GMT 2012
Rank167Aligned Residues141
% Identity12%Templatec3k30B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140. ... .....150.. .......160.........170.......
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Query Sequence  EAVALSMDDAVRLNSCAVAAQ. . . VYI. . . . . . . . . . . . . . . . . GSEYEHQS. . . IKNIIQLVDAGMKVGMPTMAVTGVG
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Template Sequence  RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDEC. AGRAAVACRITVE
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   156...160.........170.........180.........190.........200.........210.........220. ........230....
 
   178.180.. .......190.........200..... ....210.........220.........230........
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Query Sequence  KDMVR. . DQRYFSLATRIAAEMGAQIIKTY. . . . . . . . . . . . . . . . . YVEKGFERIVAGCPVPIVIAGGKKLPEREALEM
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Template Sequence  EEIDGGITREDIEGVLRELGE. LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDA. . . . .
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TTTTTTTGGG
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   235....240.........250..... ....260.........270.........280.........290.........300........
 
   239240...... ...250.........260........
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Query Sequence  CWQAIDQG. ASGVDMGRNIFQSDHPVAMMKA
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Template Sequence  MVRQIKAGILDLIGAARPSIADPFLPNKIRD
Template Known Secondary structure  TTS
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   309310.........320.........330.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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