Return to main results Retrieve Phyre Job Id

Job DescriptionP76143
Confidence79.46%DateThu Jan 5 12:19:36 GMT 2012
Rank347Aligned Residues139
% Identity9%Templatec3js3C_
PDB info PDB header:lyaseChain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.... .....140.........150.........160.........170.........180.........190.........200......
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Query Sequence  DDAVRLN. SCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYY
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Template Sequence  KEISNTGLVDLIDVELFMG. . . . . . . DEVIDEVVNFAHKKEVKVIISNHDFN. KTPKKEEIVSRLCRMQELGADLPKIAV
Template Known Secondary structure  TS

SGGG
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TT
S
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   103......110.........120. ........130.........140....... ..150.........160.........170....
 
   207..210.... .....220.........230.........240.........250.........260.........270.....
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Query Sequence  VEKGFERI. . . . . . . . . . . VAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHH
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Template Sequence  MPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVISRLCGE. . IFGSALTFGAAKSVSAPGQISFKELNSVLNLLHK
Template Known Secondary structure 

SSTT
SS
B
TGGGT
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B

BSSS
SSTT

BT
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   175....180.........190.........200.........210........ .220.........230.........240.........250..
 
   276
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Query Sequence  N
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Template Sequence  S
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   253
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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