Return to main results Retrieve Phyre Job Id

Job DescriptionP76143
Confidence94.81%DateThu Jan 5 12:19:36 GMT 2012
Rank250Aligned Residues118
% Identity11%Templatec3ivuB_
PDB info PDB header:transferaseChain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og
Resolution2.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140....... ..150.........160.........170.........180.........190.........
Predicted Secondary structure 







.......












Query SS confidence 




















. . . . . . .



















































Query Sequence  MDDAVRLNSCAVAAQVYIGSE. . . . . . . YEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGA
Query Conservation 

 








 

   

 ....... 
   
  
  
 
     




      
    
   

  



 



Alig confidence 

















.

.......






















..


























Template Conservation 
  
   
   
 
    .
             
      
  

  
  
..     
  
                

Template Sequence  ARVAVETGVDGVDVVIGT. SQYLRKYSHDMTYIIDSATEVINFVKSKGIEV. . RFSSEDSFRSDLVDLLSLYKAVDKIGV
Template Known Secondary structure  TT
S

G.GG




TT
..
TTGGGS


Template Predicted Secondary structure 




.






..










Template SS confidence 















































































   111........120........ .130.........140.........150.........160 .........170.........180.......
 
   200........ .210.........220.........230.. .......240.........250
Predicted Secondary structure 



.........










.



Query SS confidence 








. . . . . . . . .























.

















Query Sequence  QIIKTYYVE. . . . . . . . . KGFERIVAGCPVPIVIAGGKKLPE. REALEMCWQAIDQGASGV
Query Conservation 



     .........
    

     



 

    
.   
     

 


 

Alig confidence 








.........

















...


.

















Template Conservation 
 
 
 

 
   
     

  
     
 
  
 ...


 


 

 



 


  
Template Sequence  NRVGIADTVGCATPRQVYDLIRTLRGVVSCDIECHF. . . HNDTGMAIANAYCALEAGATHI
Template Known Secondary structure  SSSS



SS...B
TTS
T

Template Predicted Secondary structure 













...








Template SS confidence 




























































   190.........200.........210.........220..... ....230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions