Job Description P76143 Confidence 94.81% Date Thu Jan 5 12:19:36 GMT 2012 Rank 250 Aligned Residues 118 % Identity 11% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	.	.	.	.	.	.	.	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																				.			.	.	.	.	.	.	.																								.	.
Template Conservation																				.																																	.	.
Template Sequence		A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	.	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	.	.	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V
Template Known Secondary structure								T	T		S								G	.	G	G																										T	T				.	.					T	T	G	G	G	S
Template Predicted Secondary structure																				.																																	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.										.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																									.
Query SS confidence											.	.	.	.	.	.	.	.	.																									.
Query Sequence		Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	.	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V
Query Conservation											.	.	.	.	.	.	.	.	.																									.
Alig confidence											.	.	.	.	.	.	.	.	.																			.	.	.				.
Template Conservation																																						.	.	.
Template Sequence		N	R	V	G	I	A	D	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	.	.	.	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I
Template Known Secondary structure		S							S	S	S																			S	S							.	.	.	B		T	T	S													T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions