Job Description P76143 Confidence 91.09% Date Thu Jan 5 12:19:36 GMT 2012 Rank 311 Aligned Residues 213 % Identity 13% Template c3gyeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, putative; PDBTitle: didydroorotate dehydrogenase from leishmania major Resolution 2.00 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	A	F	D	H	G	Y	F	Q	G	P	T	T	G	L	E	R	I	D	I	N	I	A	P	L	F	E	H	A	D	V	L	M	C	T	R	G	I	L	R	S	V	V	P	P	A	T	N	R	P	V	V	L	R	A	S	G	A	N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	.
Query Conservation																																																																																	.
Alig confidence																																				.	.																																												.
Template Conservation																																				.	.
Template Sequence		N	T	F	A	N	P	F	M	N	A	A	G	V	M	C	T	T	T	E	E	L	V	A	M	T	E	S	A	S	G	S	L	V	S	.	.	K	S	C	T	P	A	L	R	E	G	N	P	T	P	R	Y	Q	A	L	P	L	G	S	I	N	S	M	G	L	P	N	N	G	F	D	F	Y	L	A	Y	A	A	E	Q
Template Known Secondary structure					S	S	S					T	T	S	S		S	S										S	S		S					.	.					S	S		B			S		S							T	T										B													T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	D	Y	G	K	K	P	L	F	L	S	M	S	G	L	S	M	R	E	N	V	E	M	C	K	R	L	A	A	V	A	T	E	K	G	V	I	L	E	L	N	L	D	F	D	A	M	R	Q	C	L	T	A	V	S	E	V	Y	P	H	S	F	G	V	K	M	P	P	Y	F	D	F	A	H	F	D	A	A	A	E
Template Known Secondary structure				T	T	T										S	S																																												S											S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																																			.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		R	I	A	A	E	M	G	A	Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	.	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		I	L	N	E	F	P	K	V	Q	F	I	T	C	I	N	S	I	G	N	G	L	V	I	D	A	E	T	E	S	V	V	I	K	P	K	Q	G	F	G	G	L	G	G	R	Y	V	L	P	T	A	L	A	N	I	N	A	F	Y	R	R	C	P	G	K	L	I	F	G	C	G	G	V	Y	T	G	E	D	.	.	.
Template Known Secondary structure					T		T	T																		T	T	T	T			S		S	G	G	G	G						G	G	G	G																T	T	S						S	S			S				.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	.	.	D	H	P	V	A	M	M	K	A	V	Q	A	V	V
Query Conservation																									.	.
Alig confidence		.	.																						.	.
Template Conservation		.	.
Template Sequence		.	.	A	F	L	H	V	L	A	G	A	S	M	V	Q	V	G	T	A	L	Q	E	E	G	P	S	I	F	E	R	L	T	S	E	L	L	G	V	M
Template Known Secondary structure		.	.								T															T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions