Job Description P76143 Confidence 95.16% Date Thu Jan 5 12:19:36 GMT 2012 Rank 240 Aligned Residues 127 % Identity 20% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	.	.	.	.	.	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I
Query Conservation																																						.	.	.	.	.
Alig confidence																	.	.	.	.																		.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	.	.	.	.	L	E	Q	Y	H	D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	I	S	E	L	E	P	Y	L	D	Q	.	.	.	.	.	.	.	.	.	I	D	V
Template Known Secondary structure								T	T		S						.	.	.	.	T	T		T	T	S									T	T						T	T													T	T	S		G	G	G	G	T	T	T	T	T	T	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150
		202	.	.											.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																																.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																																.	.
Query Sequence		I	K	T	.	.	.	.	.	.	.	.	.	.	Y	Y	V	E	K	G	F	E	R	I	V	A	.	.	.	.	.	.	.	.	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	.	.	S	G	V	D	M	G	R	N	I	F	Q	S	D	H
Query Conservation					.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																																.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																	.	.	.	.	.	.										.	.												.
Template Conservation																																																			.	.	.	.	.	.																							.
Template Sequence		I	Q	L	L	T	L	D	P	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	.	.	.	.	.	.	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	.	G	E
Template Known Secondary structure						S			T	T	T	T																				G	G	G	G	G	G							S	S						.	.	.	.	.	.							S	S	S									G	G	G	G	S	.	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.																							.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.
		262	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	A	M	M	K	A	V	Q	A	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	T	N	L	K	V	W	K	S	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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