Job Description P76143 Confidence 98.48% Date Thu Jan 5 12:19:36 GMT 2012 Rank 73 Aligned Residues 188 % Identity 13% Template c3bo9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nitroalkan dioxygenase; PDBTitle: crystal structure of putative nitroalkan dioxygenase (tm0800) from2 thermotoga maritima at 2.71 a resolution Resolution 2.71 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																		.	.	.	.												.	.	.
Query SS confidence																																																		.	.	.	.												.	.	.
Query Sequence		R	L	S	R	I	F	N	P	K	T	G	K	T	V	M	L	A	F	D	H	G	Y	F	Q	G	P	T	T	G	L	E	R	I	D	I	N	I	A	P	L	F	E	H	A	D	V	L	M	.	.	.	.	C	T	R	G	I	L	R	S	V	V	P	.	.	.	P	A	T	N	R	P	V	V	L	R	A	S	G	A
Query Conservation																																																		.	.	.	.												.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																.	.	.	.												.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	T	D	L	L	E	.	.	.	.	.	.	.	.	.	.	I	E	H	P	I	L	X	G	G	X	A	W	A	G	T	P	T	L	A	A	A	V	S	E	A	G	G	L	G	I	I	G	S	G	A	X	K	P	D	D	L	R	K	A	I	S	E	L	R	Q	K	T	D	K	P	F	G	V	N	I	I	L	V
Template Known Secondary structure								T	.	.	.	.	.	.	.	.	.	.		S	S	S							T	T	T	S												T	S	B						T	T															T	T		S	S								T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.											.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	.	.	.	.	.	.	.	.	W	A	D	D	L	V	K	V	C	I	E	E	K	V	P	V	V	T	F	G	A	G	N	P	.	.	.	.	.	.	.	.	.	.	.	T	K	Y	I	R	E	L	K	E	N	G	T	K	V	I	P	V	V	A	S	.	.	.	.	.	.	.	.	.	.	.	D	S	L	A
Template Known Secondary structure		S	T	.	.	.	.	.	.	.	.	T											T	T		S						S	S			.	.	.	.	.	.	.	.	.	.	.										T	T								S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.									.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.												.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.												.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Query Sequence		R	I	A	A	E	M	G	A	Q	I	I	K	T	.	.	.	.	.	.	.	.	.	.	.	Y	Y	V	E	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.																				.	.	.
Template Conservation																																																							.	.	.	.	.
Template Sequence		R	X	V	E	R	A	G	A	D	A	V	I	A	E	G	X	E	S	G	G	H	I	G	E	V	T	T	F	V	L	V	N	K	V	S	R	S	V	N	I	P	V	I	A	A	G	G	I	A	D	G	R	G	.	.	.	.	.	X	A	A	A	F	A	L	G	A	E	A	V	Q	X	G	T	R	F	V	A	S	V
Template Known Secondary structure							T	T		S							T	T	S	S					S	S														S	S						S	S			S				.	.	.	.	.								T		S					S					T	B	S
Template Predicted Secondary structure																																																							.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		258	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	D	H	P	V	A	M	M	K	A	V	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	D	V	H	P	V	Y	K	E	K	I	V	K
Template Known Secondary structure		S			S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions