Job Description P76143 Confidence 44.21% Date Thu Jan 5 12:19:36 GMT 2012 Rank 437 Aligned Residues 116 % Identity 10% Template c3aamA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8 Resolution 1.58 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.														.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																			.								.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.
Query SS confidence																			.								.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.
Query Sequence		P	T	T	G	L	E	R	I	D	I	N	I	A	P	L	F	E	.	H	A	D	V	L	M	C	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	G	I	L	R	S	V	V	P	P	A	T	N	R	P	V	.	V	L	R	A	S	G	A	N	S	I	L	A	E	L	S	N	E	A	.	.	.	.	.	.
Query Conservation																			.								.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.
Alig confidence																			.								.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	A	G	K	K	G	V	A	G	A	V	E	E	A	T	A	L	G	L	T	A	F	Q	I	F	A	K	S	P	R	S	W	R	P	R	A	L	S	P	A	E	V	E	A	F	R	A	L	R	E	A	S	G	G	L	P	A	V	I	H	A	S	Y	L	V	N	L	G	A	E	G	E	L	W	E	K	S	V	A
Template Known Secondary structure					S	T	T													T		S						S	S		T	T			S																			T	T										T	T			T	T		S	S	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
			123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	A	L	S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M
Query Conservation		.
Alig confidence		.																							.
Template Conservation																									.
Template Sequence		S	L	A	D	D	L	E	K	A	A	L	L	G	V	E	Y	V	V	V	H	P	G	S	.	G	R	P	E	R	V	K	E	G	A	L	K	A	L	R	L	A	G	V	R	S	R	P	V	L	L	V	E	N	T	A	G	G	G	E
Template Known Secondary structure														T										B	.	S																	T			S	S	S											T	T
Template Predicted Secondary structure																									.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions