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Job Description | P76143 | Confidence | 48.51% | Date | Thu Jan 5 12:19:36 GMT 2012 |
Rank | 421 | Aligned Residues | 120 |
% Identity | 12% | Template | c2zyfA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:homocitrate synthase; |
PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate
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Resolution | 2.15 Å |
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127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | D | D | A | V | R | L | N | S | C | A | V | A | A | Q | V | Y | I | G | S | E | Y | . |
E | H | Q | S | I | K | N | I | I | Q | L | V | D | A | G | M | K | V | G | M | P | T | M | A | V | T | G | V | G | K | D | M | V | R | D | Q | R | Y | F | S | L | A | T | R | I | A | A | E | M | G | A | Q | I | I | K | T | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | K | V | A | V | E | T | G | V | Q | G | I | D | L | L | F | G | T | S | K | G | R | D | I | P | R | I | I | E | E | A | K | E | V | I | A | Y | I | R | E | A | A | P | H | V | E | V | R | F | S | A | E | D | T | F | R | S | E | E | Q | D | L | L | A | V | Y | E | . |
A | V | A | P | Y | V | D | R | V | G | L | A |
Template Known Secondary structure |   |
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|  |  |  |  |  |  |  |  |  | . |  |  | G | G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
. | . | . | 150 | . | . | . | . | . | . | . | . |
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. | 210 | . | . | . | . | . | . | . | . | |
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. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | V | E | . |
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K | G | F | E | R | I | V | A | G | C | . |
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P | V | P | I | V | I | A | G | G | K | K | L | P | E | . |
R | E | A | L | E | M | C | W | Q | A | I | D | Q | G | A | S | G | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | T | V | G | V | A | T | P | R | Q | V | Y | A | L | V | R | E | V | R | R | V | V | G | P | R | V | D | I | E | F | H | G | . |
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H | N | D | T | G | C | A | I | A | N | A | Y | E | A | I | E | A | G | A | T | H | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
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. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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