Job Description P76143 Confidence 53.85% Date Thu Jan 5 12:19:36 GMT 2012 Rank 415 Aligned Residues 154 % Identity 18% Template c2zvrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:uncharacterized protein tm_0416; PDBTitle: crystal structure of a d-tagatose 3-epimerase-related2 protein from thermotoga maritima Resolution 2.20 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.
Query Sequence		L	R	A	S	G	A	N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	.	.	.	.	.	.	.	G	V	G	K
Query Conservation																																																																							.	.	.	.	.	.	.
Alig confidence														.	.	.	.																												.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation														.	.	.	.																												.	.	.	.	.	.
Template Sequence		L	S	L	V	I	S	T	S	D	F	K	G	.	.	.	.	D	L	R	K	G	M	E	L	A	K	R	V	G	Y	Q	A	V	E	I	A	V	R	D	P	S	I	V	.	.	.	.	.	.	D	W	N	E	V	K	I	L	S	E	E	L	N	L	P	I	C	A	I	G	T	G	Q	A	Y	L	A	D	G	L	S
Template Known Secondary structure														.	.	.	.													T		S							S		G	G	G	S	.	.	.	.	.	.													T									T					T	T
Template Predicted Secondary structure														.	.	.	.																												.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		179	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230
Predicted Secondary structure										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Query Sequence		D	M	V	R	D	Q	R	Y	.	.	.	.	.	.	.	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	.	.	.	.	.	.	G	K	K	L
Query Conservation										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	H	P	N	D	E	I	R	K	K	A	I	E	R	V	V	K	H	T	E	V	A	G	M	F	G	A	L	V	I	I	G	L	V	R	G	R	R	E	G	R	S	Y	E	E	T	E	E	L	F	I	E	S	M	K	R	L	L	E	L	T	E	H	A	K	F	V	I	E	P	L	N	R	Y	E	T	D	F	I
Template Known Secondary structure		T	T		S	S																						T						S	G	G	G				T	T	S																					S	S										T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	.	.	D	M	G	R	N	I	F	Q	S	D	H	P	V	A	M	M	K	A	V
Query Conservation																						.	.
Alig confidence																						.	.
Template Conservation
Template Sequence		N	T	I	D	D	A	L	R	I	L	R	K	I	N	S	N	R	V	G	I	L	A	D	T	F	H	M	N	I	E	E	V	N	I	P	E	S	L	K	R	A
Template Known Secondary structure			S														T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions