|   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
|
|
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | D | D | A | V | R | L | N | S | C | A | V | A | A | Q | V | Y | I | G | S | E | Y | E | H | Q | S | I | K | N | I | I | Q | L | V | D | A | G | M | K | V | G | M | P | T | M | A | V | T | G | V | G | K | D | M | V | R | D | Q | R | Y | . |
. |
. |
. |
F | S | L | A | T | R | I | A | A | E | M | G | A | Q | I | I |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   | . | . | . | . |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |   |   |   |
| . | . | . | . | . | . |   |   |
|
|   |   |
|
|   |   |   | . |   |   |   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|   |   |
Template Sequence |   |
A | R | R | A | A | E | L | G | A | D | A | L | L | F | N | V | F | A | Y | G | . |
. |
. |
. |
. |
. |
L | D | V | M | Q | G | L | A | E | D | P | . |
E | I | P | V | P | I | M | A | H | P | A | V | S | G | A | F | T | S | S | P | F | Y | G | F | S | H | A | L | L | L | G | K | L | N | R | Y | C | G | A | D | F | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| S |  |  |  |  |
| G | G | G | T |
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
| T | . | T |
|
| S |
|  |  |  |
|
| T | T | T |  |  |  |  | S |
| S | S | S | S | B |
|  |  |  |  | T | T |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 250 | . | . | . | . | . | . | . | . | |
. | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |
  |   |
203 | . | . | . | . | . | |
|
|
|
|
|
|
. | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
K | T | Y | Y | V | E | . |
. |
. |
. |
. |
. |
. |
K | G | F | E | R | I | V | A | G | C | P | V | . |
. |
. |
. |
. |
. |
P | I | V | I | A | G | G | K | K | L | P | E | R | E | A | L | E | M | C | W | Q | A | I | D | Q | G | A | S | G | V | D | M | G | R | N | I | F | Q | S | D | H | . |
P | V | A | M | M | K | A |
Query Conservation |   |
|   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |   |   |   | . | . | . | . | . | . |
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
| . |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
| . |   |   |   |
|   |
|
|   |   |   |   |   |   | . | . |
|   |
|   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|   |
|
Template Sequence |   |
L | F | P | S | P | Y | G | S | V | A | L | P | R | A | D | A | L | A | I | H | E | E | C | V | R | E | D | A | F | N | Q | T | F | A | V | P | S | A | G | . |
I | H | P | G | M | V | P | L | L | M | R | D | F | . |
. |
G | I | D | H | I | I | N | A | G | G | G | V | H | G | H | P | N | G | A | Q | G | G | G | R | A |
Template Known Secondary structure |   |
 |  |
|
| S | S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S | S |
|
|
|  |  |  |  |
| T | T | . |
|
| G | G | G |  |  |  |  |  |  |  |  | . | . |
| S | S | B |  |  |  |
| T | T | T | T | T | T | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | |
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | |
|
. | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
  |
  |   |
269 | 270 | . | . | . | . | |
|
|
. | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Q | A | V | V | H | . |
. |
. |
H | N | E | T | A | D | R | A | Y | E | L | Y | L | S |
Query Conservation |   |
|   |   |
|
|
| . | . | . |
|   |   |
|   |   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |   |
|
Template Sequence |   |
F | R | A | I | I | D | A | V | L | E | A | Q | P | I | D | E | K | A | E | Q | C | K | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 |
  |