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Job DescriptionP76143
Confidence80.78%DateThu Jan 5 12:19:36 GMT 2012
Rank344Aligned Residues77
% Identity18%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  AVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQI
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Template Sequence  GLVEPWHMALRMEAYSLHPFYFNIIP. . . . . . . . . . ELVEGCKKNGVKLFPWTV. . . . . . DRKEDMERMIK. . . . AGVDG
Template Known Secondary structure 

SSTTT
SBGGG

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B

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S....T
S
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   176...180.........190.........200. ........210......... 220.........230 .....
 
   202.......210........
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Query Sequence  IKTYYVEKGFERIVAGC
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Template Sequence  IITDDPETLINLVRKGG
Template Known Secondary structure  S
TTT
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   236...240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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