Job Description P76143 Confidence 98.43% Date Thu Jan 5 12:19:36 GMT 2012 Rank 75 Aligned Residues 182 % Identity 15% Template c2gjlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein pa1024; PDBTitle: crystal structure of 2-nitropropane dioxygenase Resolution 2.00 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																		.	.	.	.	.										.	.	.
Query SS confidence																																																		.	.	.	.	.										.	.	.
Query Sequence		R	L	S	R	I	F	N	P	K	T	G	K	T	V	M	L	A	F	D	H	G	Y	F	Q	G	P	T	T	G	L	E	R	I	D	I	N	I	A	P	L	F	E	H	A	D	V	L	M	.	.	.	.	.	C	T	R	G	I	L	R	S	V	.	.	.	V	P	P	A	T	N	R	P	V	V	L	R	A	S	G
Query Conservation																																																		.	.	.	.	.										.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.										.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	T	E	T	F	G	.	.	.	.	.	.	.	.	.	.	V	E	H	P	I	M	Q	G	G	M	Q	W	V	G	R	A	E	M	A	A	A	V	A	N	A	G	G	L	A	T	L	S	A	L	T	Q	P	S	P	E	A	L	A	A	E	I	A	R	C	R	E	L	T	D	R	P	F	G	V	N	L	T	L
Template Known Secondary structure								T	.	.	.	.	.	.	.	.	.	.		S	S	S							T	T	T		S										T	T	S	B					T	T	T	S	S	S																S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.											.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A
Query Conservation
Alig confidence						.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	T	Q	.	.	.	.	K	P	V	P	Y	A	E	Y	R	A	A	I	I	E	A	G	I	R	V	V	E	T	A	G	N	D	P	.	.	.	.	.	.	.	.	.	.	.	G	E	H	I	A	E	F	R	R	H	G	V	K	V	I	H	K	C	T	A	.	.	.	.	.	.	.	.	.	.	.	V	R	H
Template Known Secondary structure					S	.	.	.	.	S														T	T									S			.	.	.	.	.	.	.	.	.	.	.										T	T								S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.												.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.												.	.	130
		191	.	.	.	.	.	.	.	.	200	.	.	.	.														.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	I	A	A	E	M	G	A	Q	I	I	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	V	E	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		A	L	K	A	E	R	L	G	V	D	A	V	S	I	D	G	F	E	C	A	G	H	P	G	E	D	D	I	P	G	L	V	L	L	P	A	A	A	N	R	L	R	V	P	I	I	A	S	G	G	F	A	D	G	R	G	.	.	.	.	.	L	V	A	A	L	A	L	G	A	D	A	I	N	M	G	T	R	F	L
Template Known Secondary structure								T	T		S							T	T		S	B				S	S													T	T			S						S	S			S				.	.	.	.	.								T		S					S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		258	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	R	E
Template Known Secondary structure		T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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