Job Description P76143 Confidence 99.52% Date Thu Jan 5 12:19:36 GMT 2012 Rank 28 Aligned Residues 191 % Identity 12% Template c2fdsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:orotidine-monophosphate-decarboxylase; PDBTitle: crystal structure of plasmodium berghei orotidine 5'-2 monophosphate decarboxylase (ortholog of plasmodium3 falciparum pf10_0225) Resolution 1.72 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Query Sequence		L	E	R	I	D	I	N	I	A	P	L	F	E	H	A	D	V	L	M	C	T	R	G	I	L	R	S	V	V	P	P	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	P	V	V	L	R	A	S	G	A	N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		N	H	F	C	F	Y	I	I	N	N	T	K	E	Y	A	L	I	Y	K	M	N	F	A	F	Y	I	P	Y	G	S	V	G	I	N	A	L	K	N	V	F	D	Y	L	N	S	M	N	I	.	.	.	.	.	.	.	.	.	.	P	T	M	L	D	M	K	I	N	D	I	G	N	T	V	K	N	Y	R	K	F	I
Template Known Secondary structure													G	G	G		S						G	G	G	T	G	G	G	T																	T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
					133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.												.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	.	.	.	.	.	.	.	.	.	.	.	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G
Query Conservation		.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																								.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		F	E	Y	L	K	S	D	S	C	T	I	N	V	Y	M	G	T	S	M	L	K	D	I	C	F	D	.	.	.	.	Y	E	K	N	K	Y	Y	S	A	Y	V	L	I	K	T	T	N	K	D	S	F	I	F	Q	N	E	L	S	I	N	D	K	Q	A	Y	I	V	M	A	E	E	T	Q	K	M	A	T	D	L	K
Template Known Secondary structure			T	T	S			S							T	T		S	T	T					S			.	.	.	.	T	T	T	T												S	S	G	G	G					T	T				T	T																			T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		199	200							.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure				.	.	.	.	.	.								.
Query SS confidence				.	.	.	.	.	.								.
Query Sequence		A	Q	.	.	.	.	.	.	I	I	K	T	Y	Y	V	.	E	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	D	H	P	V	A	M	M	K	A	V	Q	A
Query Conservation				.	.	.	.	.	.								.
Alig confidence				.	.	.	.	.	.								.																							.	.	.
Template Conservation																																								.	.	.
Template Sequence		I	D	Q	N	N	E	F	I	G	F	V	V	G	S	N	A	F	E	E	M	K	I	I	R	N	K	F	P	D	S	Y	I	L	S	P	G	I	D	.	.	.	L	Y	K	T	L	K	N	G	Y	N	K	D	Y	E	K	L	L	I	N	V	G	R	A	I	T	K	S	P	N	P	K	K	S	S	E	S	Y	Y	N
Template Known Secondary structure		T	G	G	G	T									T	T												S	T	T										.	.	.											S	S	G	G	G											T	S	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		272	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	I	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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