Job Description P76143 Confidence 79.15% Date Thu Jan 5 12:19:36 GMT 2012 Rank 350 Aligned Residues 137 % Identity 9% Template c2ejaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 aquifex aeolicus Resolution 1.90 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	I	K	N	.	.	.	.	.	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.																					.	.											.	.	.	.	.	.	.
Template Conservation																																																								.	.											.	.	.	.	.	.	.
Template Sequence		L	K	E	Q	I	K	A	G	A	D	V	V	Q	I	F	D	S	W	V	N	N	L	S	L	E	D	Y	G	E	Y	V	Y	P	Y	V	N	Y	L	I	S	E	L	K	D	F	S	D	T	P	V	I	Y	F	F	.	.	R	G	S	S	S	F	I	D	L	A	.	.	.	.	.	.	.	V	D	Y	R	A	D	A
Template Known Secondary structure								T	T		S							T	T	G	G	G	S									T																	S							.	.	S	S									.	.	.	.	.	.	.	T	T	S			S
Template Predicted Secondary structure																																																								.	.											.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.								.	250	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																														.	.	.	.	.																				.	.	.
Query SS confidence																														.	.	.	.	.																				.	.	.
Query Sequence		I	K	T	Y	Y	V	E	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	.	.	.	.	.	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	.	.	.	G	V	D	M	G	R	N	I	F	Q	S	D	H	P	V	A	M	M	K	A	V	Q	A	V	V
Query Conservation																														.	.	.	.	.																				.	.	.
Alig confidence							.														.	.								.	.	.	.	.																				.	.	.
Template Conservation							.														.	.
Template Sequence		L	S	V	D	W	.	S	V	D	I	P	E	L	F	K	I	Y	D	K	.	.	G	F	Q	G	N	L	E	P	A	V	L	Y	A	S	E	E	V	I	E	E	K	T	L	G	L	L	R	R	I	P	V	K	T	R	Y	V	F	N	L	G	H	G	L	A	P	D	M	E	L	E	K	V	K	Y	L	V	D	L	V
Template Known Secondary structure						T	.	T	S										S	S	.	.						B		G	G	G	G	G	S														T	T				S	S	S			B		B	S	S				T	T	S
Template Predicted Secondary structure							.														.	.
Template SS confidence
		256	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		274	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		333	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions