Job Description P76143 Confidence 78.79% Date Thu Jan 5 12:19:36 GMT 2012 Rank 354 Aligned Residues 120 % Identity 16% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																														.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.																														.	.	.	.
Query Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	S	.	.	.	.	.	.	.	.	.	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	.	.	.	.	R	D	Q	R	Y	F	S	L	A	T	R	I
Query Conservation																												.	.	.	.	.	.	.	.	.																														.	.	.	.
Alig confidence																				.								.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation																				.
Template Sequence		F	E	A	A	V	A	A	G	A	K	E	V	V	I	F	G	A	A	.	S	E	L	F	T	K	K	N	I	N	C	S	I	E	E	S	F	Q	R	F	D	A	I	L	K	A	A	Q	S	A	N	I	S	V	R	G	Y	V	S	C	A	L	G	C	P	Y	E	G	K	I	S	P	A	K	V	A	E	V	T	K	K
Template Known Secondary structure								T	T		S								S	.									T	S	S		T	T	T															T	T									S	T	T		B	T	T	T	B	S
Template Predicted Secondary structure																				.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.										.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.												.														.
Query SS confidence																	.	.	.	.	.	.	.	.	.												.														.
Query Sequence		A	A	E	M	G	A	Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	.	V	P	I	V	I	A	G	G	K	K	L	P	E	.	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	S	G	V
Query Conservation																	.	.	.	.	.	.	.	.	.												.														.
Alig confidence																	.	.	.	.	.	.	.	.	.												.								.	.	.				.
Template Conservation																																													.	.	.
Template Sequence		F	Y	S	M	G	C	Y	E	I	S	L	G	D	T	I	G	V	G	T	P	G	I	M	K	D	M	L	S	A	V	M	Q	E	V	P	L	A	A	L	A	V	H	C	.	.	.	H	D	T	Y	G	Q	A	L	A	N	T	L	M	A	L	Q	M	G	V	S	V	V
Template Known Secondary structure					T	T		S							T	T																			S		G	G	G						.	.	.	B		T	T	S												T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions