Return to main results Retrieve Phyre Job Id

Job DescriptionP76143
Confidence84.24%DateThu Jan 5 12:19:36 GMT 2012
Rank332Aligned Residues109
% Identity17%Templatec1vs1B_
PDB info PDB header:transferaseChain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.. .......150.........160.........170.........180.........190.......
Predicted Secondary structure 



.........














Query SS confidence 















. . . . . . . . .






















































Query Sequence  MDDAVRLNSCAVAAQV. . . . . . . . . YIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEM
Query Conservation 

 








 

 .........  

  
   
  
  
 
     




      
    
   

  



 

Alig confidence 















.........






.....



















....








.......


Template Conservation 
  
   
    
    



    
 
 
 
.....

  
       

   


.... 
       .......   
Template Sequence  ALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLE. . . . . GLKLLRRAGDEAGLPVVTEV. . . . LDPRHVETV. . . . . . . SRY
Template Known Secondary structure  T
S
BSS


SSTTS



T.....T


....

GGG.......
Template Predicted Secondary structure 
















.....



....

.......
Template SS confidence 















































































   58.60.........70.........80......... 90.........100......... 110........ .120.
 
   198.200........ .210.........220.........230.........240.........250..
Predicted Secondary structure 





...














Query SS confidence 










. . .











































Query Sequence  GAQIIKTYYVE. . . KGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDM
Query Conservation 





     ...
    

     



 

    
   
     

 


 



Alig confidence  .









...











































Template Conservation  .

   



   
  

   
  



 

 
      
   


 
   

  
 
Template Sequence  . ADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVL
Template Known Secondary structure  .
S
GGGTT





TT

TT


Template Predicted Secondary structure  .






















Template SS confidence 

























































   122.......130.........140.........150.........160.........170........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions