Job Description P76143 Confidence 96.61% Date Thu Jan 5 12:19:36 GMT 2012 Rank 201 Aligned Residues 146 % Identity 13% Template c1gehE_ PDB info PDB header:lyase Chain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase) Resolution 2.80 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																										.	.	.	.	.	.
Query SS confidence																				.																																										.	.	.	.	.	.
Query Sequence		M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	.	G	S	E	Y	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G	V	G	K	D	M	V	R	D	Q	R	.	.	.	.	.	.	Y	F	S	L	A	T	R	I	A	A	E	M	G	A
Query Conservation																				.																																										.	.	.	.	.	.
Alig confidence																				.		.	.	.	.	.	.	.																																		.	.	.	.	.	.									.	.	.
Template Conservation																						.	.	.	.	.	.	.																																																.	.	.
Template Sequence		L	E	V	L	A	D	L	G	L	K	H	A	M	V	D	V	V	I	T	G	.	.	.	.	.	.	.	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	G	L	A	I	H	G	H	R	A	M	H	A	A	F	T	R	N	P	Y	H	G	I	S	M	F	V	L	A	K	L	Y	R	L	.	.	.	I	G	I
Template Known Secondary structure									T													.	.	.	.	.	.	.														T	T								T	T	T					S		T	T	S														.	.	.		T
Template Predicted Secondary structure																						.	.	.	.	.	.	.																																																.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.				.	.	310
		200	.	.	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.																				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.		.	.	250	.
Predicted Secondary structure											.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.				.
Query SS confidence											.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.				.
Query Sequence		Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	.	Q	G	A	.	S	G	V	D
Query Conservation											.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.				.
Alig confidence											.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.							.				.
Template Conservation																																																													.	.	.	.	.	.
Template Sequence		D	Q	L	H	V	G	T	A	E	G	G	K	W	D	V	I	Q	N	A	R	I	L	R	E	S	H	Y	K	P	D	E	N	D	V	F	H	L	E	Q	K	F	Y	S	I	K	A	A	F	P	T	S	S	G	G	L	H	P	G	N	.	.	.	.	.	.	I	Q	P	V	I	E	A	L	G	T	D	I	V	L	Q
Template Known Secondary structure		S									T															S						T	T			S							T	T										S	S			T	T	T	.	.	.	.	.	.								T		S	S	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																.										.	.	.
Query SS confidence																.										.	.	.
Query Sequence		M	G	R	N	I	F	Q	S	D	H	P	V	A	M	.	M	K	A	V	Q	A	V	V	H	.	.	.	H	N	E	T	A	D	R	A	Y	E	L	Y	L	S
Query Conservation																.										.	.	.
Alig confidence																.										.	.	.
Template Conservation
Template Sequence		L	G	G	G	T	L	G	H	P	D	G	P	A	A	G	A	R	A	V	R	Q	A	I	D	A	I	M	Q	G	I	P	L	D	E	Y	A	K	T	H	K	E
Template Known Secondary structure			S					S		T	T																	T	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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