 |
Job Description | P76143 | Confidence | 26.09% | Date | Thu Jan 5 12:19:36 GMT 2012 |
Rank | 492 | Aligned Residues | 98 |
% Identity | 14% | Template | c1e1cA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain; |
PDBTitle: methylmalonyl-coa mutase h244a mutant
|
Resolution | 2.62 Å |
|
 |
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | R | L | N | S | C | A | V | A | A | Q | V | Y | I | G | S | E | Y | E | H | Q | S | I | K | N | I | I | Q | L | V | D | A | G | M | K | V | G | M | P | T | M | A | V | T | G | V | G | K | D | M | V | R | D | Q | R | Y | F | S | L | A | T | R | I | A | A | E | M | G | A | Q | I | I | K | T | Y | Y | V | E | K |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |   | . |
|
|   |
|   |   | . | . | . | . | . | . | . |   |   |   |
|   |
|   |
|
|   | . | . | . |
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
Template Sequence |   |
E | Q | A | E | G | R | R | P | R | I | L | L | A | K | M | G | Q | D | G | H | D | R | G | Q | K | V | I | A | T | A | Y | A | D | L | . |
G | F | D | V | D | V | . |
. |
. |
. |
. |
. |
. |
G | P | L | F | Q | T | P | E | E | T | . |
. |
. |
A | R | Q | A | V | E | A | D | V | H | V | V | G | V | S | S | L | A | G |
Template Known Secondary structure |   |
 |  |  |  | S | S |
|
|  |  |  |  |  |
| B | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  | . | . | . | . | . | . | . |
|
| T | T | B |
|  |  |  |  | . | . | . |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
591 | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | |
. | . | . | . | . | 630 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 640 | |
|
|
. | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . |
  |
  |   |
210 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | F | E | R | I | V | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | C | P | V | P | I | V | I | A | G | G | K | K | L | P | E | R | E | A | L | E | M |
Query Conservation |   |
  |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
G | H | L | T | L | V | P | A | L | R | K | E | L | D | K | L | G | R | P | D | I | L | I | T | V | G | G | V | I | P | E | Q | D | F | D | E | L | R | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  | S |
|
| G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|