Job Description P27303 Confidence 99.89% Date Thu Jan 5 11:43:50 GMT 2012 Rank 4 Aligned Residues 241 % Identity 22% Template c3lnnB_ PDB info PDB header:metal transport Chain: B: PDB Molecule:membrane fusion protein (mfp) heavy metal cation efflux PDBTitle: crystal structure of zneb from cupriavidus metallidurans Resolution 2.80 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		L	R	H	F	E	E	T	D	D	A	Y	V	A	.	.	.	G	N	Q	I	Q	I	M	S	Q	V	S	G	S	V	T	K	V	W	A	D	N	T	D	F	V	K	E	G	D	V	L	V	T	L	D	P	T	D	A	R	Q	A	F	E	K	A	K	T	A	L	A	S	S	V	R	Q	T	H	Q	L	M	I	N	S
Query Conservation															.	.	.
Alig confidence															.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	A	A	P	F	N	L	P	A	M	I	E	A	D	P	A	K	L	V	K	V	L	P	P	L	A	G	R	I	V	S	L	N	K	Q	L	G	D	E	V	K	A	G	D	V	L	F	T	I	D	S	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure																	S	S	S							S	S											T	T					S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																										.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	L	Q	A	N	I	E	V	Q	K	I	A	L	A	K	A	Q	S	D	Y	N	R	R	V	P	L	G	N	A	N	L	I	G	R	E	E	L	Q	H	A	R	D	A	V	T	S	A	Q	A	Q	L	D	V	A	I	Q	Q	Y	N	A	N	Q	A	M	I	L	G	T	K	L	E	D	Q	P	A	V	Q	Q	A
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	A	N	S	D	A	A	K	A	R	A	A	M	T	M	A	R	R	N	L	D	R	Q	R	E	L	D	K	S	E	I	A	A	K	R	D	F	E	Q	A	Q	S	D	Y	D	Q	A	A	S	E	S	Q	R	A	D	A	R	L	A	Q	L	G	A	K	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																										T	T	S	S		S	S		S	S																														T	S	S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		A	T	E	V	R	N	A	W	L	A	L	E	R	T	R	I	I	S	P	M	T	G	Y	V	S	R	R	A	V	Q	P	G	A	Q	I	S	P	T	T	P	.	L	M	A	V	V	P	A	T	N	M	W	V	D	A	N	F	K	E	T	Q	I	A	N	M	R	I	G	Q	P	V	T	I	T	T	D	I	Y	G	D
Query Conservation																																										.
Alig confidence		.	.	.	.																																					.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	L	Q	A	G	G	G	H	I	L	A	V	R	S	P	I	N	G	R	V	V	D	L	N	A	A	T	G	A	Y	W	N	D	T	T	A	S	L	M	T	V	A	D	L	S	H	V	F	V	T	A	N	A	Q	E	K	D	L	G	H	V	Y	V	G	Q	S	A	T	V	K	F	D	A	Y	D	D
Template Known Secondary structure		.	.	.	.	B			S	S			S							S	S											T	T						T	T										S										G	G	G	G	G	G			T	T								S	S	S		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	Y	T	G	K	V	V	G	L	D	M	G	T	G	S	A	F	S	L	L	P	A	Q	N	A	T	G	N	W	I	K	V	V	Q	R	L	P	V	R	I	E	L	D	Q	K	Q	L	E	Q	Y	P	L	R	I	G	L	S	T	L	V	S	V	N	T	T
Query Conservation
Alig confidence			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		P	.	.	Q	P	G	K	V	R	Y	V	G	Q	I	L	D	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	T	T	K	V	R	M	V	F	D	N	P	D	G	R	.	.	.	L	R	P	G	M	F	A	Q	A	T	F	L	S	Q
Template Known Secondary structure			.	.										S	S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												S	S			.	.	.			T	T
Template Predicted Secondary structure			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		238			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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