 |
Job Description | P06966 | Confidence | 94.62% | Date | Thu Jan 5 10:59:34 GMT 2012 |
Rank | 87 | Aligned Residues | 47 |
% Identity | 15% | Template | d1s4ka_ |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| YdiL-like
|
Resolution | 1.90 |
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | R | I | R | Y | R | R | K | N | L | K | H | T | Q | R | S | L | A | K | A | L | . |
. |
K | I | S | H | V | S | V | S | Q | W | E | R | G | D | S | E | P | T | G | K | N | L | F | A | L |
Query Conservation |   |
|   |
|
|
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|   |   |   | . | . |
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |
|
|   |   |
|
Template Sequence |   |
A | L | E | L | Q | A | L | R | R | I | F | D | X | T | I | E | E | C | T | I | Y | I | T | Q | D | N | N | S | A | T | W | Q | R | W | E | A | G | D | I | P | I | S | P | E | I | I | A | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T | S | S | S |
|
|  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|