Job Description P06966 Confidence 99.75% Date Thu Jan 5 10:59:34 GMT 2012 Rank 1 Aligned Residues 106 % Identity 18% Template c3ivpD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630. Resolution 2.02 Å

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		2	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		E	T	K	N	L	.	T	I	G	E	R	I	R	Y	R	R	K	N	L	K	H	T	Q	R	S	L	A	K	A	L	K	I	S	H	V	S	V	S	Q	W	E	R	G	D	S	E	P	T	G	K	N	L	F	A	L	S	K	V	L	Q	C	S	P	T	W	I	L	F	G	D	E	D	K	Q	P	T	P	P	V	E
Query Conservation							.
Alig confidence							.																																																																					.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		D	K	Y	D	F	R	A	L	G	L	A	I	K	E	A	R	K	K	Q	G	L	T	R	E	Q	V	G	A	X	I	E	I	D	P	R	Y	L	T	N	I	E	N	K	G	Q	H	P	S	L	Q	V	L	Y	D	L	V	S	L	L	N	V	S	V	D	E	F	F	L	P	A	S	S	Q	V	.	.	.	.	.	.
Template Known Secondary structure		G																		T	T											T	S											S																	T			S					S		T	T	S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	V	A	L	S	P	K	E	L	E	L	L	E	L	F	N	A	L	P	E	S	E	Q	D	T	Q	L	A	E	M	R	A	R	V	K	N
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	K	S	T	K	R	R	Q	L	E	N	K	I	D	N	F	T	D	A	D	L	V	I	X	E	S	V	A	D	G	I	V	K	S
Template Known Secondary structure		.	.	.	.												G	G	G
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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