Job Description P06966 Confidence 68.26% Date Thu Jan 5 10:59:34 GMT 2012 Rank 411 Aligned Residues 109 % Identity 8% Template c1rktA_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein yfir; PDBTitle: crystal structure of yfir, a putative transcriptional regulator from2 bacillus subtilis Resolution 1.95 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.									.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.
Query Sequence		L	K	H	T	Q	R	S	L	A	K	A	L	K	I	S	H	V	S	V	S	Q	W	E	R	G	D	S	E	P	T	G	K	N	L	F	A	L	S	K	V	L	Q	C	S	P	T	W	I	L	F	G	D	E	D	K	Q	.	.	.	.	.	.	.	.	P	T	P	P	V	E	K	P	V	A	L	S	P	K	E	L
Query Conservation																																																										.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	T	T	X	K	D	V	V	E	E	S	G	F	S	R	G	G	V	Y	L	Y	F	S	S	T	E	E	X	F	R	R	I	I	E	T	G	L	D	E	G	L	R	K	L	D	K	S	A	E	H	Q	S	V	W	A	S	I	S	S	Y	L	D	E	L	T	E	G	L	R	D	V	A	D	T	L	A	P	V	Q
Template Known Secondary structure		T	T											T	S							T	T		S																									T	T	T	S																	T	T	T	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	E	L	F	N	A	L	P	E	S	E	Q	D	T	Q	L	A	E	M	R	A	R	V	K	N	F	N	K	L	F	E	E	L	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	Y	L	V	T	A	W	R	N	E	E	R	R	Q	Y	L	E	K	R	Y	D	L	F	V	E	R	F	S	R	L	L	Q	K	G	I	D
Template Known Secondary structure							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions