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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | L | M | Q | L | S | E | Q | V | G | Q | A | L | K | A | R | G | A | T | V | T | T | A | E | S | C | T | G | G | W | V | A | K | V | I | T | D | . |
I | A | G | S | S | A | W | F | E | R | G | F | V | T | Y | S | N | E | A | K | A | Q | M | I | G | V | R | E | E | T | L | A | Q | H | G | A | V | S | E | P | V | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | N | Q | R | F | E | Q | T | I | X | S | G | F | F | Q | N | R | G | A | V | T | T | V | A | N | A | T | L | G | L | X | A | A | I | Q | L | K | K | R | K | K | G | K | Y | A | L | X | P | S | F | T | F | P | A | T | P | L | A | A | I | W | C | G | L | E | P | Y | F | I | D | I | S | I | D | D | W | Y | X | D | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
| S |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
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|  |  |  |  |  | S | S | S |
| T |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| B |
| T | T | T |
| S | B |
|  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
V | E | M | A | I | G | A | L | K | A | A | R | A | D | Y | A | V | S | I | S | G | I | A | G | P |
Query Conservation |   |
  |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
T | V | L | W | D | K | I | E | E | L | K | E | E | V | A | I | V | V | P | Y | A | T | F | G | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |
|
| B |
| T | T | T | B |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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Template SS confidence |   |
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  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
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