 |
Job Description | P0A6G3 | Confidence | 5.83% | Date | Thu Jan 5 11:03:05 GMT 2012 |
Rank | 36 | Aligned Residues | 66 |
% Identity | 14% | Template | c2npbA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:selenoprotein w; |
PDBTitle: nmr solution structure of mouse selw
|
Resolution | UNK |
|
 |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | E | M | A | I | G | A | L | K | A | A | R | A | D | Y | A | V | S | I | S | G | I | A | G | P | D | G | G | S | E | E | K | P | V | G | T | V | W | F | A | F | A | T | A | R | G | E | G | I | T | R | R | E | C | F | S | G | . |
. |
D | R | D | A | V | R | R | Q | A | T | A | Y | A | L | Q | T | L | W | Q |
Query Conservation |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
| . |
|
|   |
|
|   |
|
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
Y | L | Q | L | K | E | K | L | E | H | E | F | P | G | C | L | D | I | C | G | E | G | T | P | Q | V | T | G | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | E | V | T | V | . |
A | G | K | L | V | H | S | K | K | R | G | D | G | Y | V | D | T | E | S | K | F | R | K | L | V | T | A | I | K | A | A | L | A | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S | B | T | T |  |  |  |  |  |
|
|
| S | S |
|
| S |
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  | . | T | T |  |  |  |  |  | T | T | T | T |
|
| S | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|