Job Description P42620 Confidence 99.84% Date Thu Jan 5 12:01:53 GMT 2012 Rank 87 Aligned Residues 131 % Identity 24% Template c2uz8A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:eukaryotic translation elongation factor 1 PDBTitle: the crystal structure of p18, human translation elongation2 factor 1 epsilon 1 Resolution 2.0 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	R	V	T	V	P	V	L	W	D	K	K	N	H	T	I	V	S	N	E	S	A	E	I	I	R	M	F	N	T	A	F	D	A	L	G	A	K	A	G	D	Y	Y	P	P	A	L	Q	T	K	I	D	E	L	N	G	W	I	Y	D	T	V	N	N	G	V	Y	K	A	G	F	A	T	S	Q	E	A	Y	D
Query Conservation
Alig confidence																	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	E	R	Q	I	P	V	L	Q	T	N	N	G	P	.	.	S	L	X	G	L	T	T	I	A	A	H	L	V	K	Q	A	N	K	E	Y	L	L	G	S	T	A	E	E	K	A	X	V	Q	Q	W	L	E	Y	R	V	T	Q	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T	T							S	S			.	.				S												T	T		G	G	G	G		S	S																		T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	V	A	K	V	F	E	S	L	A	R	L	E	Q	I	L	G	Q	H	R	Y	L	T	G	N	Q	L	T	E	A	D	I	R	L	W	T	T	L	V	R	F	D	P	V	Y	V	T	H	F	K	C	D	K	H	R	I	S	D	Y	L	N	L	Y	G	F	L	R	D	I	Y	Q	M	P	G	I	A	E	T	V
Query Conservation
Alig confidence		.	.	.																																									.	.	.	.	.	.
Template Conservation		.	.	.																																									.	.	.	.	.	.
Template Sequence		.	.	.	N	D	I	H	T	L	L	X	D	L	N	S	Y	L	E	D	K	V	Y	L	T	G	Y	N	F	T	L	A	D	I	L	L	Y	Y	G	L	H	R	F	I	.	.	.	.	.	.	V	D	L	T	V	Q	E	K	E	K	Y	L	N	V	S	R	W	F	C	H	I	Q	H	Y	P	G	I	R	Q	H	L
Template Known Secondary structure		.	.	.														G	G	G		S	S	T	T	S	S	S																	.	.	.	.	.	.	T	T									T													S	T	T	T		T	T	S
Template Predicted Secondary structure		.	.	.																																									.	.	.	.	.	.
Template SS confidence
					89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		288
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions