Job Description P42620 Confidence 99.91% Date Thu Jan 5 12:01:53 GMT 2012 Rank 72 Aligned Residues 217 % Identity 15% Template c1bg5A_ PDB info PDB header:ankyrin binding Chain: A: PDB Molecule:fusion protein of alpha-na,k-atpase with PDBTitle: crystal structure of the ankyrin binding domain of alpha-na,2 k-atpase as a fusion protein with glutathione s-transferase Resolution 2.60 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	Y	V	S	L	A	C	P	W	A	H	R	T	L	I	M	R	K	L	K	G	L	E	P	F	I	S	V	S	V	V	N	P	L	M	L	E	N	G	W	T	F	D	D	S	F	P	G	A	T	G	D	T	L	Y	Q	N	E	F	L	Y	Q	L	Y	L	H	A	D	P	H	Y	S	G	R	V	T	V	P	V
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		I	L	G	Y	W	K	I	K	G	L	V	Q	P	T	R	L	L	L	E	Y	L	E	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	E	H	L	Y	E	R	D	E	G	D	K	W	R	N	K	K	F	E	L	G	L	E	F	.	.	.	.	P	N	L	P	Y
Template Known Secondary structure		B			S		S		S	T	T	T										T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B						G	G	G	T							T	T	T	T			S	S	.	.	.	.			S	S	B
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	D	K	K	N	H	T	I	V	S	N	E	S	A	E	I	I	R	M	F	N	T	A	F	D	A	L	G	A	K	A	G	D	Y	Y	P	P	A	L	Q	T	K	I	D	E	L	N	G	W	I	Y	D	T	V	N	N	G	V	Y	K	A	G	F	A	T	S	Q	E	A	Y	D	E	A	V	A	K	V	F	E
Query Conservation
Alig confidence					.	.	.																				.	.	.	.	.	.
Template Conservation					.	.	.																				.	.	.	.	.	.
Template Sequence		Y	I	D	.	.	.	G	D	V	K	L	T	Q	S	M	A	I	I	R	Y	I	A	D	K	H	.	.	.	.	.	.	N	M	L	G	G	C	P	K	E	R	A	E	I	S	M	L	E	G	A	V	L	D	I	R	Y	G	V	S	R	I	A	Y	S	K	D	F	E	T	L	K	V	D	F	L	S	K	L	P	E
Template Known Secondary structure					.	.	.	S	S				B	S											T	T	.	.	.	.	.	.	S		S		S	S					T																		T	T	S	S	S	T	T		S	S	S	S	T	T	T	T	T	T	S	T	T
Template Predicted Secondary structure					.	.	.																				.	.	.	.	.	.
Template SS confidence
		58	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		S	L	A	R	L	E	Q	I	L	G	Q	H	R	Y	L	T	G	N	Q	L	T	E	A	D	I	R	L	W	T	T	L	V	R	F	D	P	V	Y	V	T	H	F	K	C	D	K	H	R	I	S	D	Y	L	N	L	Y	G	F	L	R	D	I	Y	Q	M	P	G	I	A	E	T	V	N	F	D	H	I	R	.	.
Query Conservation																																																																																.	.
Alig confidence																																										.	.	.	.	.	.	.																																.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		M	L	K	M	F	E	D	R	L	C	H	K	T	Y	L	N	G	D	H	V	T	H	P	D	F	M	L	Y	D	A	L	D	V	V	L	Y	M	D	P	M	.	.	.	.	.	.	.	C	L	D	A	F	P	K	L	V	C	F	K	K	R	I	E	A	I	P	Q	I	D	K	Y	L	K	S	S	K	Y	I	A	W
Template Known Secondary structure		T	S	T	T	T	T	T	T	T	T	T	S	S	S	S	S	S	S	S			T									T	T	S	S	T	T	T		T	T	.	.	.	.	.	.	.	T	T	T	S											T	S		S								T	T	T	T				S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
							294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	N	H	Y	F	R	S	H	K	T	I	N	P	T	G	I	I	S	I	G	P	W
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		P	L	Q	G	W	Q	A	T	F	G	G	G	D	H	P	P	K	S	D	L	V	P	R	G	S	S
Template Known Secondary structure			S	S	S	S	S	T	T	T	T				S	S				S			S				T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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