 |
Job Description | Q2EEQ3 | Confidence | 1.04% | Date | Thu Jan 5 12:33:42 GMT 2012 |
Rank | 58 | Aligned Residues | 25 |
% Identity | 36% | Template | c1ry3A_ |
PDB info |
PDB header:antibiotic | Chain: A: PDB Molecule:bacteriocin carnobacteriocin b2; |
PDBTitle: nmr solution structure of the precursor for2 carnobacteriocin b2, an antimicrobial peptide from3 carnobacterium piscicola
|
Resolution | UNK |
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | F | V | T | I | A | G | C | G | V | N | A | L | . |
S | G | L | R | M | A | Q | E | S | V | G |
Query Conservation |   |
|
|
|   |   |   |   |
|
|
|
|
|
|
| . |
|
|
|   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | A | F | Q | E | R | Y | T | A | G | I | N | S | F | V | S | G | V | A | S | G | A | G | S | I | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|