Job Description P64508 Confidence 0.77% Date Thu Jan 5 12:09:02 GMT 2012 Rank 79 Aligned Residues 21 % Identity 24% Template c3u21B_ PDB info PDB header:transcription regulation, dna binding Chain: B: PDB Molecule:nuclear factor related to kappa-b-binding protein; PDBTitle: crystal structure of a fragment of nuclear factor related to kappa-b-2 binding protein (residues 370-495) (nfrkb) from homo sapiens at 2.183 a resolution Resolution 2.18 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Y	R	F	S	A	E	P	Y	I	G	A	S	C	S	N	V	S	V	L	S	M	L	C
Query Conservation
Alig confidence								.	.						.	.
Template Conservation								.	.						.	.
Template Sequence		V	E	F	E	T	Q	.	.	Q	W	L	L	S	.	.	Q	D	N	E	E	L	A	A	L	F
Template Known Secondary structure								.	.						.	.	T	T	T
Template Predicted Secondary structure								.	.						.	.
Template SS confidence
		449	450	.	.	.	.			.	.	.	.	.			460	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions