Job Description P0AAH0 Confidence 100.00% Date Thu Jan 5 11:12:54 GMT 2012 Rank 32 Aligned Residues 246 % Identity 29% Template c3b5wE_ PDB info PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba Resolution 5.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		S	M	V	E	T	A	P	S	K	I	Q	V	R	N	L	N	F	Y	Y	.	.	G	K	F	H	A	L	K	N	I	N	L	D	I	A	K	N	Q	V	T	A	F	I	G	P	S	G	C	G	K	S	T	L	L	R	T	F	N	K	M	F	E	L	Y	P	E	Q	R	A	E	G	E	I	L	L	D	G	D	N	I
Query Conservation																					.	.
Alig confidence																					.	.																																									.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		R	V	I	E	R	A	T	G	D	V	E	F	R	N	V	T	F	T	Y	P	G	R	D	V	P	A	L	R	N	I	N	L	K	I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	.	.	.	.	.	D	I	D	E	G	E	I	L	M	D	G	H	D	L
Template Known Secondary structure							S							S	S		B		B		S	S	S	S		B	S	S		S							T	T							S	S	T	T	S	S								T	T	T		S	.	.	.	.	.			B	S	S					S	S	S	B	T
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.						.	.	.	.	.	.	400	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		L	T	N	S	Q	D	I	A	L	L	R	A	K	V	G	M	V	F	Q	K	P	T	P	F	P	M	S	I	Y	D	N	I	A	F	G	V	.	R	L	F	E	K	L	S	R	A	D	M	D	E	R	V	Q	W	A	L	T	K	A	A	L	W	N	E	T	K	D	K	L	H	Q	S	G	Y	S	L	S	G	G	Q
Query Conservation																																						.
Alig confidence		.	.																																			.
Template Conservation		.	.
Template Sequence		.	.	R	E	Y	T	L	A	S	L	R	N	Q	V	A	L	V	S	Q	N	V	H	L	F	N	D	T	V	A	N	N	I	A	Y	A	R	T	E	Q	Y	S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N	G	V	L	L	S	G	G	Q
Template Known Secondary structure		.	.	T	T	S							T	T						S						S	S		B	S	T	T	T	T	S	S	S	S	T	T	S			T	T					T	T	T	T	S	T					T	T	S	S	S	S	S	B					T	T	S		S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	R	L	C	I	A	R	G	I	A	I	R	P	E	V	L	L	L	D	E	P	C	S	A	L	D	P	I	S	T	G	R	I	E	E	L	I	T	E	L	K	Q	D	Y	T	V	V	I	V	T	H	N	M	Q	Q	A	A	R	C	S	D	H	T	A	F	M	Y	L	G	E	L	I	E	F	S	N	T	D	D
Query Conservation
Alig confidence																																																													.
Template Conservation																																																													.
Template Sequence		R	Q	R	I	A	I	A	R	A	L	L	R	D	S	P	I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	R	A	I	Q	A	A	L	D	E	L	Q	K	N	R	T	S	L	V	I	A	H	R	L	S	T	I	E	K	.	A	D	E	I	V	V	V	E	D	G	V	I	V	E	R	G	T	H	N	D
Template Known Secondary structure							T					T	S			S							T	T	S	S									T	T					T	T	T	S	S	S							S	S	G	G	G	T	T	T	.		S	S	B					T	T							S	S	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	T	K	P	A	K	K	Q	T	E	D	Y	I	T	G	R	Y	G
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		L	L	E	H	.	.	R	G	V	Y	A	Q	L	H	K	M	Q	F	G
Template Known Secondary structure					S	.	.		S	S						T	T	S
Template Predicted Secondary structure						.	.
Template SS confidence
		565	.	.	.			.	570	.	.	.	.	.	.	.	.	.	580	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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