Job Description P0AAH0 Confidence 100.00% Date Thu Jan 5 11:12:54 GMT 2012 Rank 57 Aligned Residues 233 % Identity 27% Template c2ygrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra Resolution 3.40 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		R	N	L	N	F	Y	Y	G	K	F	H	A	L	K	N	I	N	L	D	I	A	K	N	Q	V	T	A	F	I	G	P	S	G	C	G	K	S	T	L	L	R	.	.	T	F	N	K	M	F	E	L	Y	P	E	Q	R	A	E	G	E	I	L	L	D	G	D	N	I	L	T	N	S	Q	D	I	A	L	L	R	A
Query Conservation																																											.	.
Alig confidence																																											.	.							.	.	.	.	.																					.	.	.
Template Conservation																																																			.	.	.	.	.																					.	.	.
Template Sequence		R	Q	L	T	V	V	G	A	R	E	H	N	L	R	G	I	D	V	S	F	P	L	G	V	L	T	S	V	T	G	V	S	G	S	G	K	S	T	L	V	N	D	I	L	A	A	V	L	A	.	.	.	.	.	N	R	L	N	G	A	R	Q	V	P	G	R	H	T	R	V	T	G	L	D	.	.	.	Y	L	D
Template Known Secondary structure		S									S	T	T			S							S	S	S							S	T	T	S	S								T							.	.	.	.	.			T	S								S	S						G	G	.	.	.	G
Template Predicted Secondary structure																																																			.	.	.	.	.																					.	.	.
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.						.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.				.	.	.
		92	.	.	.	.	.	.	.	100	.																																																															.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	G	M	V	F	Q	K	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	P	M	S	I	Y	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	V	R	I	D	Q	S	P	I	G	R	T	P	R	S	N	P	A	T	Y	T	G	V	F	D	K	I	R	T	L	F	A	A	T	N	E	A	K	V	R	G	Y	K	P	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	T	G	D	G	T	I	K	I	E	M	N	F	L	P	D	V	Y	V	P	C
Template Known Secondary structure									S		S		S	S	T	T		S						T											T	S					T	T	T			G	G	G	S		T	T	S	T	T	T	B		S	S	S	T	T	S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120																							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	A	F	G	V	R	L	F	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	R	A	D	M	D	E	R	V	Q	W	A	L	T	K	A	A	L	W	N	E	T	K	D	K	L	H	Q	S	G	Y	S	L	S	G	G	Q	Q	Q	R	L	C	I	A	R	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	C	Q	G	A	R	Y	N	R	E	T	L	E	V	H	Y	K	G	K	T	V	S	E	V	L	D	M	S	I	E	E	A	A	E	F	F	E	P	I	A	G	V	H	R	Y	L	R	T	L	V	D	V	G	L	G	Y	V	R	L	G	Q	P	A	P	T	L	S	G	G	E	A	Q	R	V	K	L	A	S	E
Template Known Secondary structure		T	T	T	T	S		S	B						T			B	T	T	B							T	S	B								S	T	T														S	S		S	S	S	B	T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		777	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
		168	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																															.																									.	.	.	.	.	.
Query SS confidence						.	.	.																															.																									.	.	.	.	.	.
Query Sequence		I	A	I	R	.	.	.	P	E	V	L	L	L	D	E	P	C	S	A	L	D	P	I	S	T	G	R	I	E	E	L	I	T	E	L	K	Q	.	D	Y	T	V	V	I	V	T	H	N	M	Q	Q	A	A	R	C	S	D	H	T	A	F	M	.	.	.	.	.	.	Y	L	G	E	L	I	E	F	S	N	T	D
Query Conservation						.	.	.																															.																									.	.	.	.	.	.
Alig confidence						.	.	.																															.															.										.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		L	Q	K	R	S	T	G	R	T	V	Y	I	L	D	E	P	T	T	G	L	H	F	D	D	I	R	K	L	L	N	V	I	N	G	L	V	D	K	G	N	T	V	I	V	I	E	H	N	L	D	V	I	.	K	T	S	D	W	I	I	D	L	G	P	E	G	G	A	G	G	G	T	V	V	A	Q	G	T	P	E
Template Known Secondary structure		S	S	S				S	S							S	S	S	T	T																				T														.				S							S	S	S	T	T	S		S						S
Template Predicted Secondary structure																																																						.
Template SS confidence
		857	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.		.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	F	T	K	P	A	K	K	Q	T	E	D	Y	I	T	G	R	Y
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		D	V	A	A	V	P	A	S	.	Y	T	G	K	F	L	A	E	V	V
Template Known Secondary structure				T	T		S	S		.							T	T	T
Template Predicted Secondary structure										.
Template SS confidence
		936	.	.	.	940	.	.	.		.	.	.	.	.	.	950	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions