Job Description P0AAH0 Confidence 100.00% Date Thu Jan 5 11:12:54 GMT 2012 Rank 47 Aligned Residues 216 % Identity 28% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	V	R	N	L	N	F	Y	Y	G	K	F	H	A	L	K	N	I	N	L	D	I	A	K	N	Q	V	T	A	F	I	G	P	S	G	C	G	K	S	T	L	L	R	T	F	N	K	M	F	E	L	Y	P	E	Q	R	A	E	G	E	I	L	L	D	G	D	N	I	L	T	N	S	Q	D	I	A	L	L	R
Query Conservation
Alig confidence														.	.																																					.	.	.	.	.	.														.	.
Template Conservation														.	.																																					.	.	.	.	.	.														.	.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	.	.	.	.	.	.	D	A	E	G	D	I	K	I	G	G	K	N	V	.	.	N	K	Y	N	R	N	S	I	R
Template Known Secondary structure														.	.	S										T	T								S	T	T	S	S									T	T	S	S	.	.	.	.	.	.									T	T			G	.	.	G	G	S
Template Predicted Secondary structure														.	.																																					.	.	.	.	.	.														.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		A	K	V	G	M	V	F	Q	K	P	T	P	F	P	M	S	I	Y	D	N	I	A	F	G	V	R	L	F	E	K	L	S	R	A	D	M	D	E	R	V	Q	W	A	L	T	K	A	A	L	W	N	E	T	K	D	K	L	H	Q	S	.	G	Y	S	L	S	G	G	Q	Q	Q	R	L	C	I	A	R	G	I	A
Query Conservation																																																														.
Alig confidence																										.	.	.	.	.	.	.																														.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		S	I	I	G	I	V	P	Q	D	T	I	L	F	N	E	T	I	K	Y	N	I	L	Y	G	.	.	.	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L
Template Known Secondary structure		T	T						S	S					S	S	B							T	T	.	.	.	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	E	V	L	L	L	D	E	P	C	S	A	L	D	P	I	S	T	G	R	I	E	E	L	I	T	E	L	K	Q	D	Y	T	V	V	I	V	T	H	N	M	Q	Q	A	A	R	C	S	D	H	T	A	F	M	Y	L	G	E	L	I	E	F	S	N	T	D	D	L	F	T	K	P	A	K	K	Q	T	E
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.																.																											.	.
Template Conservation																								.	.	.	.	.	.	.	.	.																.																											.	.
Template Sequence		K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	L	F	Q	K	A	V	E	.	.	.	.	.	.	.	.	.	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	.	.	N	G	E	Y	A
Template Known Secondary structure		T			S																			.	.	.	.	.	.	.	.	.										S	S	G	G	G	S	.	T	T		S							T	T															.	.	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																.																											.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.										.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.
		250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	I	T	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	W	N	M	Q
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions