Return to main results Retrieve Phyre Job Id

Job DescriptionP37767
Confidence94.22%DateThu Jan 5 11:57:35 GMT 2012
Rank143Aligned Residues102
% Identity12%Templated2bv6a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  GLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGD
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Template Sequence  NLTYPQFLVLTILWDE. . . . SPVNVKKVVTELALDTGTVSPLLKRXE. . . . . . . . . . . QVDLIKRERSEVDQREVFIHLT
Template Known Secondary structure  T

S....STT

TTT...........TTS
SSSTT

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   35....40.........50 .........60.........70....... ..80.........90.........
 
   93......100.........110.........120.........130.
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Query Sequence  DPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRS
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Template Sequence  DKSETIRPELSNASDKVAS. . ASSLSQDEVKELNRLLGK
Template Known Secondary structure  TT..TT

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   100.........110........ .120.........130......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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