 |
Job Description | P37767 | Confidence | 68.12% | Date | Thu Jan 5 11:57:35 GMT 2012 |
Rank | 481 | Aligned Residues | 47 |
% Identity | 13% | Template | d1sd4a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Penicillinase repressor
|
Resolution | 2.00 |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | A | Q | S | D | K | K | L | A | D | Y | L | L | L | Q | P | D | T | A | R | H | L | S | S | Q | Q | L | A | N | E | A | . |
. |
. |
. |
G | V | S | Q | S | S | V | V | K | F | A | Q | K | L | G | Y | K | G | F |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   | . | . | . | . |   |
|
|   |
|
|
|   |
|
|   |
|
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   | . | . | . | . |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |
Template Sequence |   |
E | I | S | X | A | E | W | D | V | X | N | I | I | W | D | K | . |
. |
. |
. |
K | S | V | S | A | N | E | I | V | V | E | I | Q | K | Y | K | E | V | S | D | K | T | I | R | T | L | I | T | R | L | Y | K | K | E | I |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|