Job Description P37767 Confidence 91.85% Date Thu Jan 5 11:57:35 GMT 2012 Rank 193 Aligned Residues 104 % Identity 10% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		G	L	A	Q	S	D	K	K	L	A	D	Y	L	L	L	Q	P	D	T	A	R	H	L	S	S	Q	Q	L	A	N	E	A	.	.	.	.	G	V	S	Q	S	S	V	V	K	F	A	Q	K	L	G	Y	K	G	F	P	A	L	K	L	A	L	S	E	A	L	A	S	Q	P	E	S	P	S	V	P	I	H	N	Q
Query Conservation																																		.	.	.	.
Alig confidence																				.	.	.	.											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	S	S	A	E	W	E	V	M	N	I	I	W	M	K	K	Y	.	.	.	.	A	S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	.	.	.	.	.	.	.	.	.	.	.	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S
Template Known Secondary structure																		S	S	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.			T	S							T	T
Template Predicted Secondary structure																				.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.												.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		89	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure										.	.	.	.	.																			.	.	.
Query SS confidence										.	.	.	.	.																			.	.	.
Query Sequence		I	R	G	D	D	P	L	R	.	.	.	.	.	L	V	G	E	K	L	I	K	E	N	T	A	A	M	Y	A	T	L	.	.	.	N	V	N	S	E	E	K	L	H	E	C	V	T	M	L	R	S
Query Conservation										.	.	.	.	.																			.	.	.
Alig confidence										.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		L	V	E	E	S	D	I	K	Y	K	T	S	K	N	F	I	N	K	V	Y	K	G	G	F	N	S	L	V	L	N	F	V	E	K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L	N	K
Template Known Secondary structure		S	S																		S	T	T													S															T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions