Job Description P37767 Confidence 94.77% Date Thu Jan 5 11:57:35 GMT 2012 Rank 127 Aligned Residues 114 % Identity 14% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	R	I	R	Q	R	Y	Q	G	L	A	Q	S	D	K	K	L	A	D	Y	L	L	L	Q	P	D	T	A	R	H	L	S	S	Q	Q	L	A	N	E	A	G	V	S	Q	S	S	V	V	K	F	A	Q	K	L	G	Y	K	G	F	P	A	L	K	L	A	L	S	E	A	L	A	S	Q	P	E	S	P	S
Query Conservation
Alig confidence											.																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	S	E	L	A	K	I	H	.	G	L	N	K	S	V	G	A	V	Y	A	I	L	Y	L	S	D	K	.	.	.	P	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	.	.	.	.	.	.	.	.	.	.	.	E	L	G	F	V	R	K	V	W	I	K	G
Template Known Secondary structure										T	.	T																S	S	.	.	.												T															.	.	.	.	.	.	.	.	.	.	.		T	T	S							T	T
Template Predicted Secondary structure											.																			.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.												.	.	.	70	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		V	P	I	H	N	Q	I	R	G	D	D	P	L	R	L	V	.	.	.	.	.	G	E	K	L	I	K	E	N	T	A	A	M	Y	A	T	L	N	V	N	S	E	E	K	L	H	E	C	V	T	M	L	R	S
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	K	D	I	A	K	R	K	H	D	L	I	A	K	T	Y	E	D	L	K	K	L	E	E	K	C	N	E	E	E	K	E	F	I	K	Q	K	I	K	G
Template Known Secondary structure			S	S																																					S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions