Job Description P37767 Confidence 84.57% Date Thu Jan 5 11:57:35 GMT 2012 Rank 293 Aligned Residues 96 % Identity 11% Template c3ivpD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630. Resolution 2.02 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	P	D	T	A	R	H	L	S	S	Q	Q	L	A	N	E	A	G	V	S	Q	S	S	V	V	K	F	A	Q	K	L	G	Y	K	G	F	P	A	L	K	L	A	L	S	E	A	L	A	S	Q	P	E	S	P	S	V	P	I	H	N	Q	I	R	G	D	D	P	L	R	L	V	G	E	K	L	I	K	E
Query Conservation
Alig confidence																																												.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	E	A	R	K	K	Q	G	L	T	R	E	Q	V	G	A	X	I	E	I	D	P	R	Y	L	T	N	I	E	N	K	G	Q	H	P	S	L	Q	V	L	Y	.	D	L	V	S	L	L	N	V	S	V	D	E	F	F	L	P	A	S	S	Q	V	K	S	T	K	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T											T	S											S											.							T			S					S		T	T	S							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		N	T	A	A	M	Y	A	T	L	N	V	N	S	E	E	K	L	.	.	.	H	E	C	V	T	M	L	R	S	A	R	R	I
Query Conservation																			.	.	.
Alig confidence		.																	.	.	.
Template Conservation		.
Template Sequence		.	R	R	Q	L	E	N	K	I	D	N	F	T	D	A	D	L	V	I	X	E	S	V	A	D	G	I	V	K	S	K	E	V
Template Known Secondary structure		.								G	G	G																				T
Template Predicted Secondary structure		.
Template SS confidence
			84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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