Return to main results Retrieve Phyre Job Id

Job DescriptionP37767
Confidence79.04%DateThu Jan 5 11:57:35 GMT 2012
Rank352Aligned Residues42
% Identity17%Templatec3e7lD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.
Predicted Secondary structure 









Query SS confidence 













































Query Sequence  QSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYK
Query Conservation    
  

 


 
       

 


    

 


 

 



  
Alig confidence 












....




























Template Conservation    

  
  

  ....  

   

  


 
 

  



 

 
Template Sequence  EFEKIFIEEKLRE. . . . YDYDLKRTAEEIGIDLSNLYRKIKSLNIR
Template Known Secondary structure  ....TTT
TT

TT

Template Predicted Secondary structure  ....








Template SS confidence 













































   34.....40...... ...50.........60.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions