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Job DescriptionP37767
Confidence76.07%DateThu Jan 5 11:57:35 GMT 2012
Rank386Aligned Residues184
% Identity11%Templatec3a11D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70... ......80.......
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Query Sequence  LADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEA. . . . . . . . . . . . . LASQPESPSVPIHN
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Template Sequence  VVKEVLEIAEKIKNMEIRGAGKIARSAAYALQLQAEKSKATNVDEFWKEMKQAAKILFETRPTAVSLPNALRYVMHRGKI
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  QIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDM
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Template Sequence  AYSSGADLEQLRFVIINAAKEFIHN. SEKALERIGEFGAKRIEDGDVIMTHCHS. . . KAAISVMKTAWEQGK. . . . . . . .
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   83......90.........100....... ..110.........120.........130..... ....140.........150
 
   168.170.........180.........190.........200.........210.........220.........
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Query Sequence  HALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLY
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Template Sequence  . . . . . . . . . . . . . DIKVIVTETRPKWQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVM
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TTTTTT


GGGTTTTGGG
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   151........160.........170.........180.........190.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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