Job Description P37767 Confidence 99.80% Date Thu Jan 5 11:57:35 GMT 2012 Rank 11 Aligned Residues 159 % Identity 21% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																																					.	.	.	.	.	.
Query SS confidence																										.	.	.																																					.	.	.	.	.	.
Query Sequence		R	L	V	G	E	K	L	I	K	E	N	T	A	A	M	Y	A	T	L	N	V	N	S	E	.	.	.	E	K	L	H	E	C	V	T	M	L	R	S	A	R	R	I	I	L	T	G	I	G	A	S	G	L	V	A	Q	N	F	A	W	K	L	M	.	.	.	.	.	.	K	I	G	F	N	A	A	A	V	R	D
Query Conservation																										.	.	.																																					.	.	.	.	.	.
Alig confidence																										.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	R	I	K	A	C	F	T	E	S	I	Q	T	Q	I	A	A	A	E	A	L	P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T
Template Known Secondary structure																							S																	T	T								S	T															T		S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		167	.	.	170	.	.	.	.																.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Query Sequence		M	H	A	L	L	A	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	S	S	P	D	D	L	L	L	A	I	S	Y	T	G	V	R	R	E	L	N	L	A	A	D	E	M	L	R	V	G	G	K	V	L	A	I	T	G	F	T	P	N	A	L	Q	Q	R	.	.	.	A	S	H	C	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Conservation
Template Sequence		D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I
Template Known Secondary structure										T	T	S	T	T	G	G	G	T	T										T	T								S	S	S															T	T									T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		Y	T	I	A	E	E	Q	A	T	N	S	A	S	I	S	A	C	H	.	.	A	Q	G	M	L	T	D	L	L	F	I	A	L	I	Q	Q
Query Conservation																				.	.
Alig confidence							.	.	.	.	.	.	.	.						.	.
Template Conservation							.	.	.	.	.	.	.	.
Template Sequence		R	I	P	S	H	.	.	.	.	.	.	.	.	R	S	A	R	I	Q	E	M	H	M	L	T	V	N	C	L	C	D	L	I	D	N	T
Template Known Secondary structure				S		S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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