Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAH8
Confidence95.37%DateThu Jan 5 11:12:57 GMT 2012
Rank417Aligned Residues24
% Identity38%Templatec2zamA_
PDB info PDB header:protein transportChain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b; PDBTitle: crystal structure of mouse skd1/vps4b apo-form
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.
Predicted Secondary structure 









Query SS confidence 























Query Sequence  REGQTLAIIGENGSGKSTLAKMLA
Query Conservation    

   


 








  
 
Alig confidence 























Template Conservation      



 







 

 


Template Sequence  TPWRGILLFGPPGTGKSYLAKAVA
Template Known Secondary structure 


S
STTS
Template Predicted Secondary structure 









Template SS confidence 























   165....170.........180........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions