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Job DescriptionP0AAH8
Confidence100.00%DateThu Jan 5 11:12:57 GMT 2012
Rank25Aligned Residues252
% Identity25%Templatec2yz2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSF
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Template Sequence  IEVVNVSHIFHRGTP. . . . LEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGYE. . .
Template Known Secondary structure  TTTST....T

TT

STT

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STT

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   3......10....... ..20.........30.........40.........50.........60.........70.....
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  RSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARAL
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Template Sequence  IRRNIGIAFQYPEDQFFA. ERVFDEVAFAVKNFYPDRDPVPLVKKAMEFVGLDF. DSFKDRVPFFLSGGEKRRVAIASVI
Template Known Secondary structure  GGG
SSGGGG


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TTS
T

.TTS
GGGS
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   76...80.........90... ......100.........110.........120........ .130.........140.........150...
 
   166...170.........180.........190.........200.........210.........220.........230.........240. ..
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Query Sequence  ILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTADVLAS. . PL
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Template Sequence  VHEPDILILDEPLVGLDREGKTDLLRIVEKWKTL. GKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEKYDPR
Template Known Secondary structure  TT

SSTTTT

T.T

S
GGG
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   154.....160.........170.........180....... ..190.........200.........210.........220.........230..
 
   244.....250.........260.......
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Query Sequence  HELTKRLIAGHFGEALTADAWRKD
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Template Sequence  FFTSKMLVMRRLVLKGEDPFSMSD
Template Known Secondary structure  T

TTT

TTT

S
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   233......240.........250......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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