Job Description P0AAH8 Confidence 100.00% Date Thu Jan 5 11:12:57 GMT 2012 Rank 6 Aligned Residues 231 % Identity 29% Template c2it1B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii Resolution 1.94 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	R	N	L	S	K	T	F	R	Y	R	T	G	W	F	R	R	Q	T	V	E	A	V	K	P	L	S	F	T	L	R	E	G	Q	T	L	A	I	I	G	E	N	G	S	G	K	S	T	L	A	K	M	L	A	G	M	I	E	P	T	S	G	E	L	L	I	D	D	H	P	L	H	F	G	D	Y	S	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		I	K	L	E	N	I	V	K	K	F	.	.	.	.	.	.	.	.	.	G	N	F	T	A	L	N	N	I	N	L	K	I	K	D	G	E	F	M	A	L	L	G	P	S	G	S	G	K	S	T	L	L	Y	T	I	A	G	I	Y	K	P	T	S	G	K	I	Y	F	D	E	K	D	V	T	E	L	P	P	K	D
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	T	T													T	T									T	T	S	S										T	S	S			S							T	T				T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.										.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	Q	R	I	R	M	I	F	Q	D	P	S	T	S	L	N	P	R	Q	R	I	S	Q	I	L	D	F	P	L	R	L	N	T	D	L	E	P	E	Q	R	R	K	Q	I	I	E	T	M	R	M	V	G	L	L	P	D	H	V	S	Y	Y	P	H	M	L	A	P	G	Q	K	Q	R	L	G	L	A	R	A	L
Query Conservation
Alig confidence		.	.											.	.																				.																					.
Template Conservation		.	.											.	.																				.																					.
Template Sequence		.	.	R	N	V	G	L	V	F	Q	N	W	.	.	A	L	Y	P	H	M	T	V	Y	K	N	I	A	F	P	L	E	L	R	.	K	A	P	R	E	E	I	D	K	K	V	R	E	V	A	K	M	L	H	I	.	D	K	L	L	N	R	Y	P	W	Q	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L
Template Known Secondary structure		.	.		T						T	T		.	.				T	T	S													T	.	T																	T	T		.	G	G	G	T	T	S		G	G	G	S
Template Predicted Secondary structure		.	.											.	.																				.																					.
Template SS confidence
				75	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	R	P	K	V	I	I	A	D	E	A	L	A	S	L	D	M	S	M	R	S	Q	L	I	N	L	M	L	E	L	Q	E	K	Q	G	I	S	Y	I	Y	V	T	Q	H	I	G	M	M	K	H	I	S	D	Q	V	L	V	M	H	Q	G	E	V	V	E	R	G	S	T	A	D	V	L	A	S	P	L	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	E	P	E	V	L	L	L	D	E	P	L	S	N	L	D	A	L	L	R	L	E	V	R	A	E	L	K	R	L	Q	K	E	L	G	I	T	T	V	Y	V	T	H	D	Q	A	E	A	L	A	M	A	D	R	I	A	V	I	R	E	G	E	I	L	Q	V	G	T	P	D	E	V	Y	Y	K	P	K	Y	K
Template Known Secondary structure		T	T			S						S	G	G	G	G	S																				T								S										S							T	T														S		S	B
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		246	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	K	R	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	G	G	F	L
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions