Job Description P0AAH8 Confidence 100.00% Date Thu Jan 5 11:12:57 GMT 2012 Rank 50 Aligned Residues 216 % Identity 20% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	R	N	L	S	K	T	F	R	Y	R	T	G	W	F	R	R	Q	T	V	E	A	V	K	P	L	S	F	T	L	R	E	G	Q	T	L	A	I	I	G	E	N	G	S	G	K	S	T	L	A	K	M	L	A	G	M	I	E	P	T	S	G	E	L	L	I	D	D	H	P	L	H	F	G	D	Y	S	F
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	.	.	.	.	.	.	.	.	.	.	.	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.		S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.												.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		R	S	Q	R	I	R	M	I	F	Q	D	P	S	T	S	L	N	P	R	Q	R	I	S	Q	I	L	D	F	P	L	R	L	N	T	D	L	E	P	E	Q	R	R	K	Q	I	I	E	T	M	R	M	V	G	L	L	P	D	H	V	S	Y	Y	.	P	H	M	L	A	P	G	Q	K	Q	R	L	G	L	A	R	A
Query Conservation																																																																.
Alig confidence																	.	.	.												.	.	.	.																														.
Template Conservation																	.	.	.												.	.	.	.
Template Sequence		I	R	S	I	I	G	I	V	P	Q	D	T	I	L	F	.	.	.	N	E	T	I	K	Y	N	I	L	Y	G	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C
Template Known Secondary structure				T	T						S	S					.	.	.	S	S	B							T	T	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure																	.	.	.												.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	L	R	P	K	V	I	I	A	D	E	A	L	A	S	L	D	M	S	M	R	S	Q	L	I	N	L	M	L	E	L	Q	E	K	Q	G	I	S	Y	I	Y	V	T	Q	H	I	G	M	M	K	H	I	S	D	Q	V	L	V	M	H	Q	G	E	V	V	E	R	G	S	T	A	D	V	L	A	S	P	L	H
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.									.															.																										.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.									.															.																										.	.
Template Sequence		L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	.	.	.	.	.	.	.	.	.	.	L	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	.	.	L	N
Template Known Secondary structure				T			S												.	.	.	.	.	.	.	.	.	.									.									S	S	G	G	G	S	.	T	T		S							T	T														.	.		T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.									.															.																										.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.
		245	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	K	R	L	I	A	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	Y	A	E	M	W	N	M	Q
Template Known Secondary structure		S								T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions