Job Description P0AAH8 Confidence 100.00% Date Thu Jan 5 11:12:57 GMT 2012 Rank 41 Aligned Residues 230 % Identity 26% Template c2d3wB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:probable atp-dependent transporter sufc; PDBTitle: crystal structure of escherichia coli sufc, an atpase2 compenent of the suf iron-sulfur cluster assembly machinery Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		L	L	E	V	R	N	L	S	K	T	F	R	Y	R	T	G	W	F	R	R	Q	T	V	E	A	V	K	P	L	S	F	T	L	R	E	G	Q	T	L	A	I	I	G	E	N	G	S	G	K	S	T	L	A	K	M	L	A	G	.	.	M	I	E	P	T	S	G	E	L	L	I	D	D	H	P	L	H	F	G	D
Query Conservation																																																												.	.
Alig confidence													.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation													.	.	.	.	.	.	.	.	.
Template Sequence		M	L	S	I	K	D	L	H	V	S	V	.	.	.	.	.	.	.	.	.	E	D	K	A	I	L	R	G	L	S	L	D	V	H	P	G	E	V	H	A	I	M	G	P	N	G	S	G	K	S	T	L	S	A	T	L	A	G	R	E	D	Y	E	V	T	G	G	T	V	E	F	K	G	K	D	L	L	A	L	S
Template Known Secondary structure												S	.	.	.	.	.	.	.	.	.	S	S													T	T									T	T	S											T		T	T											T	T			G	G	G	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
			83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.
Predicted Secondary structure		.																																			.	.	.	.	.	.																																	.
Query SS confidence		.																																			.	.	.	.	.	.																																	.
Query Sequence		.	Y	S	F	R	S	Q	R	I	R	M	I	F	Q	D	P	S	T	S	L	N	P	R	Q	R	I	S	Q	I	L	D	F	P	L	R	.	.	.	.	.	.	L	N	T	D	L	E	P	E	Q	R	R	K	Q	I	I	E	T	M	R	M	V	G	L	L	P	D	H	V	S	Y	Y	P	.	H	M	L	A	P	G
Query Conservation		.																																			.	.	.	.	.	.																																	.
Alig confidence		.																.	.																		.	.	.	.	.	.																																	.
Template Conservation																		.	.
Template Sequence		P	E	D	R	A	G	E	G	I	F	M	A	F	Q	Y	P	.	.	V	E	I	P	G	V	S	N	Q	F	F	L	Q	T	A	L	N	A	V	R	S	Y	R	G	Q	E	T	L	D	R	F	D	F	Q	D	L	M	E	E	K	I	A	L	L	K	M	P	E	D	L	L	T	R	S	V	N	V	G	F	S	G	G
Template Known Secondary structure									T									.	.				T	T																		T	T																				T	T			T	T	T	T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	Q	R	L	G	L	A	R	A	L	I	L	R	P	K	V	I	I	A	D	E	A	L	A	S	L	D	M	S	M	R	S	Q	L	I	N	L	M	L	E	L	Q	E	K	Q	G	I	S	Y	I	Y	V	T	Q	H	I	G	M	M	K	H	I	S	D	Q	V	L	V	M	H	Q	G	E	V	V	E	R	G	S
Query Conservation
Alig confidence																										.																					.
Template Conservation																										.																					.
Template Sequence		E	K	K	R	N	D	I	L	Q	M	A	V	L	E	P	E	L	C	I	L	D	E	S	D	.	S	L	D	I	D	A	L	K	V	V	A	D	G	V	N	S	L	R	D	G	.	K	R	S	F	I	I	V	T	H	Y	R	I	L	D	Y	I	K	P	D	Y	V	H	V	L	Y	Q	G	R	I	V	K	S	G	D
Template Known Secondary structure																	S									.																				S	.	S	S																	S							T	T							S
Template Predicted Secondary structure																										.																					.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	D	V	L	A	S	P	L	H	E	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	L	V	K	Q	L	E	E	Q	G	Y	G
Template Known Secondary structure		T	T								T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions