Job Description P0AAH8 Confidence 100.00% Date Thu Jan 5 11:12:57 GMT 2012 Rank 13 Aligned Residues 226 % Identity 30% Template c1vciA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	E	T	L	L	E	V	R	N	L	S	K	T	F	R	Y	R	T	G	W	F	R	R	Q	T	V	E	A	V	K	P	L	S	F	T	L	R	E	G	Q	T	L	A	I	I	G	E	N	G	S	G	K	S	T	L	A	K	M	L	A	G	M	I	E	P	T	S	G	E	L	L	I	D	D	H	P	L	H	F
Query Conservation
Alig confidence					.	.											.	.	.	.	.	.	.	.	.
Template Conservation					.	.											.	.	.	.	.	.	.	.	.
Template Sequence		M	V	E	.	.	V	K	L	E	N	L	T	K	R	F	.	.	.	.	.	.	.	.	.	G	N	F	T	A	V	N	K	L	N	L	T	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	M	I	A	G	L	E	E	P	T	E	G	R	I	Y	F	G	D	R	D	V	T	Y
Template Known Secondary structure					.	.											.	.	.	.	.	.	.	.	.	T	T													T	T									T	T	S	S										T	S	S			S							T	T				T	T
Template Predicted Secondary structure					.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.			.	.	.	.	.	.	.	20	.	.										.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	Y	S	F	R	S	Q	R	I	R	M	I	F	Q	D	P	S	T	S	L	N	P	R	Q	R	I	S	Q	I	L	D	F	P	L	R	L	N	T	D	L	E	P	E	Q	R	R	K	Q	I	I	E	T	M	R	M	V	G	L	L	P	D	H	V	S	Y	Y	P	H	M	L	A	P	G	Q	K	Q	R	L	G
Query Conservation
Alig confidence							.	.										.	.	.	.	.	.	.	.													.	.	.																					.
Template Conservation							.	.										.	.	.	.	.	.	.	.													.	.	.																					.
Template Sequence		L	P	P	K	D	.	.	R	N	I	S	M	V	F	Q	H	.	.	.	.	.	.	.	.	M	T	V	Y	E	N	I	A	F	P	L	K	.	.	.	K	F	P	K	D	E	I	D	K	R	V	R	W	A	A	E	L	L	Q	I	.	E	E	L	L	N	R	Y	P	A	Q	L	S	G	G	Q	R	Q	R	V	A
Template Known Secondary structure		S		G	G	G	.	.	T	T								.	.	.	.	.	.	.	.									T	T			.	.	.																		T	T		.	G	G	G	T	T			G	G	G			S	S
Template Predicted Secondary structure							.	.										.	.	.	.	.	.	.	.													.	.	.																					.
Template SS confidence
		79	80	.	.	.			.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	A	L	I	L	R	P	K	V	I	I	A	D	E	A	L	A	S	L	D	M	S	M	R	S	Q	L	I	N	L	M	L	E	L	Q	E	K	Q	G	I	S	Y	I	Y	V	T	Q	H	I	G	M	M	K	H	I	S	D	Q	V	L	V	M	H	Q	G	E	V	V	E	R	G	S	T	A	D	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	R	A	I	V	V	E	P	D	V	L	L	M	D	E	P	L	S	N	L	D	A	K	L	R	V	A	M	R	A	E	I	K	K	L	Q	Q	K	L	K	V	T	T	I	Y	V	T	H	D	Q	V	E	A	M	T	M	G	D	R	I	A	V	M	N	R	G	Q	L	L	Q	I	G	S	P	T	E	V	Y	L
Template Known Secondary structure							T	T			S						S	T	T	T	T	S																												S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		241	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	H	E	L	T	K	R	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	N	S	V	F	V	A	T	F	I
Template Known Secondary structure		S		S	B							S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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