Job Description P0AAH8 Confidence 99.41% Date Thu Jan 5 11:12:57 GMT 2012 Rank 74 Aligned Residues 120 % Identity 23% Template c1ii8B_ PDB info PDB header:replication Chain: B: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain Resolution 3.02 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.
Query Sequence		R	I	S	Q	I	L	D	F	P	L	R	L	N	T	D	L	E	P	E	Q	R	R	K	Q	I	I	E	T	M	R	M	V	G	L	L	P	D	H	V	S	Y	Y	P	H	M	L	A	P	G	Q	K	Q	R	L	G	L	A	.	.	.	.	.	.	R	A	L	I	L	R	P	K	V	I	I	A	D	E	A	L	A
Query Conservation																																																											.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	G	E	L	A	S	E	I	F	A	E	F	T	E	G	K	Y	S	E	V	V	V	R	A	E	E	N	K	V	R	L	F	V	V	W	E	G	K	E	R	P	L	T	F	L	S	G	G	E	R	I	A	L	G	L	A	F	R	L	A	M	S	L	Y	L	A	G	E	I	S	L	L	I	L	D	E	P	T	P
Template Known Secondary structure																T	T	S										T	T								B	T	T	B				G	G	G	S																						S	S		S								S	S
Template Predicted Secondary structure
Template SS confidence
		747	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		S	L	D	M	S	M	R	S	Q	L	I	N	L	M	L	E	L	Q	E	K	Q	G	I	S	Y	I	Y	V	T	Q	H	I	G	M	M	K	H	I	S	D	Q	V	.	.	L	V	M	H	Q	G
Query Conservation																																												.	.
Alig confidence																						.															.							.	.
Template Conservation																						.															.
Template Sequence		Y	L	D	E	E	R	R	R	K	L	I	T	I	M	E	R	Y	L	K	K	.	I	P	Q	V	I	L	V	S	H	D	E	E	L	K	.	D	A	A	D	H	V	I	R	I	S	L	E	N	G
Template Known Secondary structure		S	S		S													T	G	G	G	.	S	S							S		G	G	G	G	.	G	T	S	S									S	S
Template Predicted Secondary structure																						.															.
Template SS confidence
		827	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.		.	.	.	850	.	.	.	.	.	.	.	.	.	860		.	.	.	.	.	.	.	.	.	870	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions